Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01522 ATGAAATCATCACTTGATGAGTCTAGTTACGTAGAGAACAACTCTTCTTCATCAGAAACAAGTTGCTACGAAGAAATCTTGTTAGCATCAGAACAACCAAAGAAACGTGCGGGTCGACGAAAATTCAAGGAGACAAGACATCCAGTATACAGAGGAGTACGAAGAAGGAACAACAACAAGTGGGTTTGTGAAGTGCGTGTTCCTAACGACAAGTCCACGAGGATTTGGCTAGGAACATATCCAACACCTGAGATGGCAGCACGTGCACACGACGTTGCCGCACTGGCACTTCGTGGTAAATCAGCTTGTCTTAATTTTGCTGACTCGGCGTGGCGTTTGGCGTTGCCGGCGACAAACAATGCAAAGGAGATTAGGAAAATGGCGGTGGAGGCTGCTTTGGCATTTGCCGTTGAGGACAGTAAGGAACAAATTATGATTAGTAATTGTGATGGTAATAATGTAGGTGTTATGGAAGTTGATAATAAACCTTTGCAGGGACTATGTGTGGAAGTTCCAGAGCAGGAAATGTTGCATGATTGGTTTAGGAATATGGCTGATGAGCCTTTACGATCTCCTATGACTCCATTTATAAGATATGGCAGGGATCACTCAAATAATTTTGATGTTGATCATGTTGATCCTGAGGTCTCCTTGTGGAACTTTACCATCTAA 672 0.4315 MKSSLDESSYVENNSSSSETSCYEEILLASEQPKKRAGRRKFKETRHPVYRGVRRRNNNKWVCEVRVPNDKSTRIWLGTYPTPEMAARAHDVAALALRGKSACLNFADSAWRLALPATNNAKEIRKMAVEAALAFAVEDSKEQIMISNCDGNNVGVMEVDNKPLQGLCVEVPEQEMLHDWFRNMADEPLRSPMTPFIRYGRDHSNNFDVDHVDPEVSLWNFTI 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01522 223 PRINTS Ethylene responsive element binding protein signature 73 89 IPR001471 GO:0003700|GO:0006355
Mepo1g01522 223 PRINTS Ethylene responsive element binding protein signature 50 61 IPR001471 GO:0003700|GO:0006355
Mepo1g01522 223 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 9 220 IPR045277 GO:0003700
Mepo1g01522 223 MobiDBLite consensus disorder prediction 1 22 - -
Mepo1g01522 223 CDD AP2 50 109 IPR001471 GO:0003700|GO:0006355
Mepo1g01522 223 SMART rav1_2 49 113 IPR001471 GO:0003700|GO:0006355
Mepo1g01522 223 Gene3D AP2/ERF domain 49 108 IPR036955 GO:0003700|GO:0006355
Mepo1g01522 223 ProSiteProfiles AP2/ERF domain profile. 49 107 IPR001471 GO:0003700|GO:0006355
Mepo1g01522 223 FunFam Ethylene-responsive transcription factor 2 48 108 - -
Mepo1g01522 223 Pfam AP2 domain 48 99 IPR001471 GO:0003700|GO:0006355
Mepo1g01522 223 SUPERFAMILY DNA-binding domain 49 109 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01522 Mepo-Chr1 15000111 15001474 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01522 28 221 AP2-EREBP Transcription Factor Family AT5G51990 51.429 2.44e-58 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mepo1g01522 AP2 6.6e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01522 - K09286 gmx:100779318 234.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g01522 1 15000111 15001474 Mepo1g01522 1 15000111 15001474 ECH
Mepo1g01522 1 15000111 15001474 Mepo5g00391 5 3449443 3450325 PCT