Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01520 ATGGCTTCTTCATCATCATCATCTTCTTCTTCCAAAAGACATCCAACATACCATGGAATTCGAAGCCGAGGAGGAAAATGGGTGACTGAAATCCGCGAGCCTCGTAAGACCAACCGCATATGGCTAGGCACATTTCCCACCCCTGAGATGGCAGCCGCGGCTTATGATGTCGCGGCTTTGGCCCTCAAAGGCGGGGACGCTGTTCTAAACTTCCCTAATTCAGCTAGCAAGTACCCCGTGCCGCTGTCCAATTCACCGGATGATATCCGCAGTGCTGCCACTGCTGCTGCCAAATTAATGACGGCTGAAGCCGTTAATAATGATGCTGACTTTAATGGTAGGCCTTGGTATGAAACTGAGTTTCTTGATGAAGAAGCTATATTCTCAATGCCAAGATTGATGGTAGAAATGGCTGAGGGTATGTTGCTTTCTCCTCCCAGAATGAATCCACCACCGTCTGAGTACTTGCCTGAATACTACACTTCGGGAGAAAGTTTGTGGAACTACTATTGA 513 0.4795 MASSSSSSSSSKRHPTYHGIRSRGGKWVTEIREPRKTNRIWLGTFPTPEMAAAAYDVAALALKGGDAVLNFPNSASKYPVPLSNSPDDIRSAATAAAKLMTAEAVNNDADFNGRPWYETEFLDEEAIFSMPRLMVEMAEGMLLSPPRMNPPPSEYLPEYYTSGESLWNYY 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01520 170 SUPERFAMILY DNA-binding domain 16 74 IPR016177 GO:0003677
Mepo1g01520 170 MobiDBLite consensus disorder prediction 1 15 - -
Mepo1g01520 170 SMART rav1_2 16 78 IPR001471 GO:0003700|GO:0006355
Mepo1g01520 170 CDD AP2 17 74 IPR001471 GO:0003700|GO:0006355
Mepo1g01520 170 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 11 154 IPR045277 GO:0003700
Mepo1g01520 170 Pfam AP2 domain 18 64 IPR001471 GO:0003700|GO:0006355
Mepo1g01520 170 MobiDBLite consensus disorder prediction 1 23 - -
Mepo1g01520 170 ProSiteProfiles AP2/ERF domain profile. 16 72 IPR001471 GO:0003700|GO:0006355
Mepo1g01520 170 Gene3D AP2/ERF domain 16 74 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01520 Mepo-Chr1 14975479 14976538 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01520 6 169 AP2-EREBP Transcription Factor Family AT5G52020 51.397 1.29e-44 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mepo1g01520 AP2 7.5e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01520 - - vra:106768065 219.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g01520 1 14975479 14976538 Mepo1g01520 1 14975479 14976538 ECH
Mepo1g01520 1 14975479 14976538 Mepo5g00390 5 3443375 3444390 PCT