Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01516 ATGTTGGCTGGTTGTTCTAGCTCGACATTGTTGTCACCAACTCACAGATTAAGGAGTGAAGCATCAGCACAGTTTCAAGCTTGTCATTTTCAGCTACCATCAATGAGCACACAGAGATTGGACTTACCTTGTAGCTTCCCTCGGAAAGACGGTTCTTCGCGTTCGCAGCAGCCGTTGAGGCCGGTGGGGATATCAGTGGAGAAGCCTGAAGTCAAGAACAACAGCAGCAGTACTTGTTCTCTGCAGCAGAACATTCGGTTACCGCCTTTAGCAACAACTGCTCAGTCATTGGGAGAGATCAAGGATGAGGAGTTTTGGGAGAAGGGTGGGAGGAGTTTGAAGAGGCTTGCAGAACATGGATCATTGGATGAGTCTTTTGCAAATAGAGCTAAAAGGAAAAAGGGTAATGGTGGTGATGAGAATTTTGATGAATTTGAAAGGGAAAGTTTCAGTTTGGCACAATTTGGAGCTGGAAACTTTTGGTCTGTTCACAGTTTTGGAGGGTTTAATAATAGCCCTTCACTTCCTTTCTCTTTGAATTGTTCTGGAGATGAGGAAAGGGTTTGTTTTGCTCCCGCTGAAGTGATTTCTGCACCTTTGCCTTTGTCTAACAATCCTTGGCTTGAATCTGCTGTAACAAAGATCACCAATTTCGGTGAGGGTAGCCACCAACATCAACATCATCATGTCAATGAAGGTTCAGTCTCTAATGGTTCATCAGAGAGTCAGAGTTTGAGCCTGAGGTTGAACGACAATGCATCAGAACATGAAGAGGGTAATGGTTCAGGGAATCCTTATCAGCATGAAGGAACTGAAGTGGAGACAGGAGAAGAGGACGAAGAAGAGGAGCATCGCGGTTTTGAGCTTTTGAGCTTGCTTACTGGTTGTGTTGATGCTATTGGATCAAGGAATGTGGCTGCAGTAAACCATTTCATTGCTAAATTGGGGGATCTTGCATCTCCAAGGGGAACTTCGATAAGCCGAATTTGTGCTTATTTTACTGAAGCCTTAGCCATCAGAGTCACTAGGCTTTGGCCTCATGTTTTTCACATCAGCGCCACTTCTCGCGATTTTGACAGGGTGGTGGATGATGATGAAACTGTCACTGCATTAAGGCTTCTAAATCAGGTTACCCCAATCCCCAAGTTTCTTCATTTCACATCGAATGAGATGCTGTTGAGGGCTTTTGAAGGGAAGGAAAGGGTTCACATTATAGACTTCGACATAAAGCAAGGACTACAATGGCCTAGCTTGTTCCAAAGTTTAGCTTCAAGGGCTAATCCTCCAAGCCATGTTCGAATCACAGGCGTGGGGGAATCGAAGCAAGAGTTGAATGAAACTGGAGACAGACTTGCTGGTTTTGCTGAGGCATTGAACCTTCCCTTTGATTTTCATCCAGTAGTCGACAGACTTGAAGACGTAAGGCTTTGGATGCTTCATGTGAAGGAACATGAAACTGTGGCTGTGAACTGTGTTTTGCAGCTTCACAAGACACTTCATGATGGTAGTGGAGGAGCATTGAGAGACTTTTTGGGCCTCATTCGTAGCACCAATCCTACAATTGTTGTTATGGCAGAGCAAGAAGCGGAACACAATGAGGCAAGGTTGGACTCAAGAGTATGCAATTCATTGAAATATTACTCAGCGCTGTTTGATTCAATTGATCACAGTGGCCTTCCACTAGAGAGTCCGATGAGGATCAAGATAGAGGAGATGTTGGCTAGGGAGATAAGGAACATCGTTGCTTGCGAAGGAAGGGACAGGTTGGAGAGGCACCAGAGTTTTGGGAATTGGAGAAAGATGATAGTGGAGCATGGAGGGTTCAGATGCATGGGAGTCACTGATAGGGAACTGATTCAGAGCCAGTTTCTGTTGAAGATGTATTCTTGTGATAATTACAGTGTTCAGAAGCAGGAGCAGGAAGGAGCAACAGCACTTACTTTGGGTTGGCTTGATCAACCTCTCTACACAGTATCTTCTTGGACACCAGTTGATGTTGCTGGAAGCTCATCCTCTTTTTCTCAGCCAGCTTGA 2034 0.4499 MLAGCSSSTLLSPTHRLRSEASAQFQACHFQLPSMSTQRLDLPCSFPRKDGSSRSQQPLRPVGISVEKPEVKNNSSSTCSLQQNIRLPPLATTAQSLGEIKDEEFWEKGGRSLKRLAEHGSLDESFANRAKRKKGNGGDENFDEFERESFSLAQFGAGNFWSVHSFGGFNNSPSLPFSLNCSGDEERVCFAPAEVISAPLPLSNNPWLESAVTKITNFGEGSHQHQHHHVNEGSVSNGSSESQSLSLRLNDNASEHEEGNGSGNPYQHEGTEVETGEEDEEEEHRGFELLSLLTGCVDAIGSRNVAAVNHFIAKLGDLASPRGTSISRICAYFTEALAIRVTRLWPHVFHISATSRDFDRVVDDDETVTALRLLNQVTPIPKFLHFTSNEMLLRAFEGKERVHIIDFDIKQGLQWPSLFQSLASRANPPSHVRITGVGESKQELNETGDRLAGFAEALNLPFDFHPVVDRLEDVRLWMLHVKEHETVAVNCVLQLHKTLHDGSGGALRDFLGLIRSTNPTIVVMAEQEAEHNEARLDSRVCNSLKYYSALFDSIDHSGLPLESPMRIKIEEMLAREIRNIVACEGRDRLERHQSFGNWRKMIVEHGGFRCMGVTDRELIQSQFLLKMYSCDNYSVQKQEQEGATALTLGWLDQPLYTVSSWTPVDVAGSSSSFSQPA 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01516 677 MobiDBLite consensus disorder prediction 42 65 - -
Mepo1g01516 677 Pfam GRAS domain family 290 662 IPR005202 -
Mepo1g01516 677 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 243 658 IPR005202 -
Mepo1g01516 677 MobiDBLite consensus disorder prediction 220 284 - -
Mepo1g01516 677 MobiDBLite consensus disorder prediction 231 269 - -
Mepo1g01516 677 ProSiteProfiles GRAS family profile. 280 662 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01516 Mepo-Chr1 14936958 14940236 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01516 1 662 GRAS Transcription Factor Family AT1G63100 55.857 0.0 691
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mepo1g01516 GRAS 3.9e-124 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01516 - - tcc:18606459 950.273