Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01513 ATGGGAAAAGCATCAAGGTGGTTTCGTGGCCTTCTTGGTCTCAAAAAAACCGAACATGGTTCTTCTTCTGATCAAAAACCACCTAAAGAGAAACGTAGATGGAGTTTTGTAAAATCATACAGAGAGGAACAACAACATAGCAGCCACGTCACGTTTCCAACAGAACATGTTCAAAACAACAATAATAATAACAGACAGGCCATCGCTGTGGCCGCTGCCGCGGCAGCAGCTGCGGAGGTTGCCGTAGCAAATACTGCCGAGGTTGTCAGATTTAATTACAGCAGTAATGGCATCGTCAGGATACGAGAACAATGGGCCGCCGTTAAGATCCAAGCCGCTTTTCGTGGAAGTTTGGCAAGGAAGGCACTACGAGCATTAAAAGGACTGGTGAAACTCCAGGCACTGGTGAGAGGTCACATTGAGAGGAAACGAACAGCAGAGTGGCTCAAAAGAATGCAATCACTTTTACGGGCACAGGCACGATTTAATGCATCACGCACCATGCAAACCTCACATTTGAATGCAAAATCATCTATACTCCATCTCCATGGTCCAGCAACACCAGAAAAATCTGAAAGCCCTGTTAGATCTAGGAGCATGAAATCTGAGCATTCACCTGGACTTAAGAGAAATGGTTCCAAATCGTGTCTCTCCAACGGCGGCAACATATCAGAAAATCAGTTAGACGAACAATCATGGAATAGAGTGAGATCACTAATAAGAACATATAGCAGGAGGGACGAAAAAAGTGATAGGATTGTTGAAATTGATTCGGGAAAACAACACATCAATGCAAAACGCAGAAACCTCTTTTACTCCACAAGTGATCCTGATTATTATTATAGTCAGAATTTGACCCCTTCAAAGGAATCAAAATCTCATCAATTTGGTCAAAGTGTATCTTGTGAGGTTCAATCTTATTACAACCCACTAAAACTTAACGAAGTTGAAGAGGACTCGTTTTGTACCGCAAACAATAGTCCTCAACCTTTATCATCTGCAACTTCAAAAGATGATGGTTACAATAGAAGTCCTTTTACTCCTACAAGAAGCGATGGCCCAAGAAGCTATGTTAGAGGCTACTCTGATTACCCAAGTTACATGGCTTATACAGAGTCAGCAAAGGCCAAAGTTAGATCTCTGAGTGCACCAAAACAAAGGCCTCAATATGAGAAATCGAGTTCGTCAAATAGGTACTCACTCAATGGACACGACATGGCAAGATTGGCCGCACAGAGAACATCTGCATTGCAAGCAAGCTTCACTAGCAAAGGCTATCCTGGTTCTGGTCGTTTGGATAAGCTTGGAATGCCTGTAGGGTATAGATATTGA 1332 0.4279 MGKASRWFRGLLGLKKTEHGSSSDQKPPKEKRRWSFVKSYREEQQHSSHVTFPTEHVQNNNNNNRQAIAVAAAAAAAAEVAVANTAEVVRFNYSSNGIVRIREQWAAVKIQAAFRGSLARKALRALKGLVKLQALVRGHIERKRTAEWLKRMQSLLRAQARFNASRTMQTSHLNAKSSILHLHGPATPEKSESPVRSRSMKSEHSPGLKRNGSKSCLSNGGNISENQLDEQSWNRVRSLIRTYSRRDEKSDRIVEIDSGKQHINAKRRNLFYSTSDPDYYYSQNLTPSKESKSHQFGQSVSCEVQSYYNPLKLNEVEEDSFCTANNSPQPLSSATSKDDGYNRSPFTPTRSDGPRSYVRGYSDYPSYMAYTESAKAKVRSLSAPKQRPQYEKSSSSNRYSLNGHDMARLAAQRTSALQASFTSKGYPGSGRLDKLGMPVGYRY 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01513 443 MobiDBLite consensus disorder prediction 321 351 - -
Mepo1g01513 443 ProSiteProfiles IQ motif profile. 127 154 IPR000048 GO:0005515
Mepo1g01513 443 MobiDBLite consensus disorder prediction 194 208 - -
Mepo1g01513 443 MobiDBLite consensus disorder prediction 321 358 - -
Mepo1g01513 443 Pfam IQ calmodulin-binding motif 130 144 IPR000048 GO:0005515
Mepo1g01513 443 Pfam IQ calmodulin-binding motif 105 124 IPR000048 GO:0005515
Mepo1g01513 443 MobiDBLite consensus disorder prediction 377 401 - -
Mepo1g01513 443 SMART iq_5 102 124 IPR000048 GO:0005515
Mepo1g01513 443 SMART iq_5 125 146 IPR000048 GO:0005515
Mepo1g01513 443 MobiDBLite consensus disorder prediction 386 401 - -
Mepo1g01513 443 MobiDBLite consensus disorder prediction 209 224 - -
Mepo1g01513 443 Gene3D - 102 155 - -
Mepo1g01513 443 MobiDBLite consensus disorder prediction 180 224 - -
Mepo1g01513 443 Pfam Protein of unknown function (DUF4005) 327 412 IPR025064 -
Mepo1g01513 443 ProSiteProfiles IQ motif profile. 103 131 IPR000048 GO:0005515
Mepo1g01513 443 PANTHER IQ-DOMAIN 5-RELATED 1 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01513 Mepo-Chr1 14894710 14898273 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01513 104 443 IQD Protein Family AT4G23060 44.944 1.21e-65 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01513 - - gmx:100793587 496.123