Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01511 ATGGCGACGACGGATCCAACGCCGTTAATCGGAAGTTCGTCCGACGAATCGAACTCCGGACGGAGAATTCTCCGTGCGCCGAGTCTCCGGCAAGCGGCGCGGTTTCTACGACAAGCGAGTGGGCGGAGGTTGATGCGTGAGCCGTCGATGATGGTGAGGGAAACCGCAGCTGAACAATTGGAAGAACGGCAAAGTGATTGGGCGTATTCGAAGCCAGTGGTGATTCTAGATATTCTGTGGAATTTCGTGTTTATTATTGCGGCGGGTACTGTGTTGATTTTGAGTCGGAATGAATCGCCGAGTTCGCCGCTTAGGTTGTGGATTTTAGGGTATGCGTTGCAGTGTGTTCTTCATGTTGTGTGTGTTTGTTTTGAGTATAGGAGACGGGTGCGGATGCGGGGAGAGGTCAATGGAAATGGTGGTAATGTGGTTGGAGGTGGTGGTAGTGGGGATTTGAGCTTTGATTCAATGGATAGTTCTGGACAGTATGTGAATTTGGCACAGTATGGGGACGATGGTTCTACAAGTATGGCAAAGCATTTGGAATCAGCCAACACAATGTTTTCTTTTATTTGGTGGGTCATTGGATTCTATTGGGTATCGGCTGATGGTCAAGATTTGATCCATGATTCTCCTAATCTTTACTGGTTATGTATAGTCTTCTTGGGTTTTGATGTTTTCTTTGTCGTTTTCTGTATTGCGCTGGCATGCATCATTGGTATTGCTGTTTGCTGTTGTCTTCCATGTATCATTGCGCTTCTGTATGCAGTTGCAGACCAGGAAGGGGCAACAAAAGAAGACATCGAGCAGTTGTCAAAATTCAAATTCCAAAGAAAAAGTAATGAGAAGCTTGCTGATAATACACAAGGACCTGTTGGAGGAATAATGATTGAATGTCAAGCTGATTCCCCAATTGAACACGTGCTTGCCGATGAAGATGCGGAGTGTTGCATCTGCCTTTCTGCCTATGATGACGGGGCTGAACTTAGACAACTTCCTTGTGGTCACCATTTTCACTGTACCTGTGTGGACAAATGGTTGCACATCAATGCTACTTGCCCCCTCTGCAAGTATAACATCTTGAAAAGTAGCAGCCATGGTCAAGAGGAAGTGTAG 1116 0.4624 MATTDPTPLIGSSSDESNSGRRILRAPSLRQAARFLRQASGRRLMREPSMMVRETAAEQLEERQSDWAYSKPVVILDILWNFVFIIAAGTVLILSRNESPSSPLRLWILGYALQCVLHVVCVCFEYRRRVRMRGEVNGNGGNVVGGGGSGDLSFDSMDSSGQYVNLAQYGDDGSTSMAKHLESANTMFSFIWWVIGFYWVSADGQDLIHDSPNLYWLCIVFLGFDVFFVVFCIALACIIGIAVCCCLPCIIALLYAVADQEGATKEDIEQLSKFKFQRKSNEKLADNTQGPVGGIMIECQADSPIEHVLADEDAECCICLSAYDDGAELRQLPCGHHFHCTCVDKWLHINATCPLCKYNILKSSSHGQEEV 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01511 371 MobiDBLite consensus disorder prediction 1 21 - -
Mepo1g01511 371 CDD RING-H2_RNF6-like 315 357 - -
Mepo1g01511 371 ProSiteProfiles Zinc finger RING-type profile. 316 357 IPR001841 -
Mepo1g01511 371 FunFam E3 ubiquitin-protein ligase At1g12760 302 367 - -
Mepo1g01511 371 PANTHER TARGET OF ERK KINASE MPK-1 40 362 - -
Mepo1g01511 371 SMART ring_2 316 356 IPR001841 -
Mepo1g01511 371 Pfam Ring finger domain 315 357 IPR001841 -
Mepo1g01511 371 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 303 370 IPR013083 -
Mepo1g01511 371 SUPERFAMILY RING/U-box 306 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01511 Mepo-Chr1 14880171 14886994 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01511 7 366 C3H Transcription Factor Family AT1G68070 47.945 9.02e-116 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01511 - - gmx:100779757 596.275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g01511 1 14880171 14886994 Mepo5g00375 5 3289351 3296824 PCT