Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01493 ATGGACGCTGCTGCAATGGAATCTCTCTCCACCTCTGCTGCGCATTTCTCTGGTTGGCACCCTTCTTCATCCTCTTCTCATAACAGCGTCTTCCTCATTGGAGTCTCTGGTGGTACCGCATCCGGGAAAACCACAGTTTGTGATATGATCATTCAACAACTGCAAGATCATAGAGTTGTTCTCGTCAATCAGGATTCTTTCTATCGTGGTTTAACGAATGATGAGTCGAAACGTGTTCATGAGTATAATTTTGATCATCCTGATGCATTTGATACAGACCGACTTGTAGAAACACTCATCAAACTTAAATCTGGACAATCAGTTAAGGTTCCTGTTTATGATTTTAAGCTCCACCAAAGAGCTTCTGACAGATATCGACAGGTCAATGCATCTGAAGTAATCATCCTAGAGGGTATATTGGTTTTTCATGAACCACGTGTCCGTGACATGATGAACATGAAGATATTTGTCGATGCAGATCCTGATGTAAGGCTTGGCCGCAGAATTAGACGAGACACTGTCGAGAGGGGTAGAGATGTGCACTCTGTACTGGAACAGTATGCGAAATTTGTTAAGCCCGCCTTCGATGATTTTATTCTTCCATCCAAAAAGTATACCGATATTATCATACCTCGTGGGGGAGACAATTGTGTAGCAATTGACTTGATCGTTCAACATATCCACACTAAGCTTGGCCAACATTGCCTCTGTAAGATATATCCAAATTTGAATGTTATACAGTCTACTTTCCAGACTAGAGGCATGCACACTCTTATTCGTGATAAAGAAATATCTAAGCATGACTTTGTTTTTTATTCAGATCGGCTAATTCGTTTGGTAGTGGAACATGGTCTTGGTTACTTGCCATTTACAGAAAAACAAGTTACAACACCTACAGGATCAATTTATATTGGAGTTGATTTTTGTAAGAAATTGTGTGGAGTATCTATTATTCGAAGTGGTGAAAGCATGGAAAATGCTCTGCGTGCATGTTGTAAAGGAATAAAAATAGGAAAAATTCTCATCCACCGTGAAGGTGATGAAACCCAGCTTATTTATGAGAAGCTCCCGAAAGATATTTCAGAGAGACATGTTCTTCTCATGGACCCAGTACTTGGTACAGGTAACTCTGCAAGCCAATCAATTGAGCTTCTTATAAAGAAGGGAGTTCCAGAGTCCCGGATAATATTCCTCAACCTTGTTTCGGCTCCCGAGGGGATACATTGTGTCTGTAAACGTTTTCCGCACCTGAAAGTTGTTACTTCCGAGATTGATGAAGGACTAAATCACCAGTTTCATGTCGTGCCTGGATTAGGAGAATTTGGTGACCGCTATTTTGGTACAGATGACTCCTAA 1356 0.4093 MDAAAMESLSTSAAHFSGWHPSSSSSHNSVFLIGVSGGTASGKTTVCDMIIQQLQDHRVVLVNQDSFYRGLTNDESKRVHEYNFDHPDAFDTDRLVETLIKLKSGQSVKVPVYDFKLHQRASDRYRQVNASEVIILEGILVFHEPRVRDMMNMKIFVDADPDVRLGRRIRRDTVERGRDVHSVLEQYAKFVKPAFDDFILPSKKYTDIIIPRGGDNCVAIDLIVQHIHTKLGQHCLCKIYPNLNVIQSTFQTRGMHTLIRDKEISKHDFVFYSDRLIRLVVEHGLGYLPFTEKQVTTPTGSIYIGVDFCKKLCGVSIIRSGESMENALRACCKGIKIGKILIHREGDETQLIYEKLPKDISERHVLLMDPVLGTGNSASQSIELLIKKGVPESRIIFLNLVSAPEGIHCVCKRFPHLKVVTSEIDEGLNHQFHVVPGLGEFGDRYFGTDDS 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01493 451 PANTHER URIDINE KINASE 19 359 - -
Mepo1g01493 451 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 25 223 IPR027417 -
Mepo1g01493 451 CDD UMPK 32 230 IPR000764 -
Mepo1g01493 451 Pfam Uracil phosphoribosyltransferase 248 448 - -
Mepo1g01493 451 NCBIfam uridine kinase 27 230 IPR000764 -
Mepo1g01493 451 PRINTS Uridine kinase signature 176 187 - -
Mepo1g01493 451 PRINTS Uridine kinase signature 198 211 - -
Mepo1g01493 451 PRINTS Uridine kinase signature 60 71 - -
Mepo1g01493 451 PRINTS Uridine kinase signature 162 172 - -
Mepo1g01493 451 PRINTS Uridine kinase signature 30 47 - -
Mepo1g01493 451 PRINTS Uridine kinase signature 105 120 - -
Mepo1g01493 451 Gene3D - 235 448 IPR029057 -
Mepo1g01493 451 FunFam Uridine kinase 234 448 - -
Mepo1g01493 451 SUPERFAMILY PRTase-like 234 449 IPR029057 -
Mepo1g01493 451 CDD PRTases_typeI 303 421 IPR000836 -
Mepo1g01493 451 Pfam Phosphoribulokinase / Uridine kinase family 32 218 IPR006083 GO:0005524|GO:0016301
Mepo1g01493 451 FunFam Uridine kinase 27 233 - -
Mepo1g01493 451 Gene3D - 26 234 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01493 Mepo-Chr1 14689547 14695760 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01493 31 450 PRT Gene Family AT5G40870 83.135 0.0 730
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01493 K00876 - gmx:100816209 771.541
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g01493 1 14689547 14695760 Mepo1g01493 1 14689547 14695760 ECH