LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo1g01482	ATGATGCTGGGAGATCCGCCGCCGTCACTCTCCTTCAAATCCAAACCCCTACTCACAAGATGTAGAATCCTTGGTGGTGGTGATGCGATGATGCCCTGTTGTGATGCGTTTTTCCGCGTCTTGCATCCGCATCACCTTGTTAGGATTGTTCACGGTGGCCGCCGTGCCCGTGAGTGTTTCCTGGTGGTTGTTCTTGGTTCGTCGGCTCTTTTTCTCCTCTCCTTCTGGCGGCCATCGTTATCTCTATTTAATCCTCAATCGTCGCTTTTCCTTTTGGTTATTGCCATTTTCAAGGAACAGAGAGTTAATTCGTTTATTCAAGTCTTGTTCTCACAGAAACCTTCAATCCACATTGCGCTACTGATCAGGATGACAGAACCTGAAATAGCAATTGGAATTGACATTGGCACATCACCATGCCGTGTTTCTGTGTGGAAAGGTACCCAAGAAGGGGTTGGGAGGATGGTTTTCCTTCCTATTTCAAATTTCCCATTTCTGATGCACACCTTGGACATTAAGGTTCGTCCTTTTATTGCTACAATTGCAAATAAAGCGTGTAGATCCACCACTGCAGTAGAACTCCTTGAAAAATTTCTGGTGAAATTAAAGTTTTCGGTTGAAATTCAGGTGAAAAGACCTATAAGAAAGGTAGTGTTTACAGTTCCAGTTTCATTCACTCGATTGCAGCGAACCTGGATAGAACGCGCTTCTGCGTGGGCTGATCTTGATGATGTCGAACTGATGCCTCAACCAATAGCAGTGGCTTTGTTTTATGCACAACAACAACTGCAGACTTCTGCTTCTTCTCTTGAGGATATGAACAATGAACGAAAAAATATTGCTCTCGTTTTCAATATGGATGCTGGTTATTGTGATGTTGCTGTCATTGCTGCAGAAAAAGGGAAACTTCGAATAAAAGCCCTGAGAGGAAGTCCTATTGGTAGAGAAGATTTGCTTGAAAATATGATTTGTCATCTCTTACCTGTTTCTAAAAATATATTCAAGAAACGTGTTCATGAGGACAGAGAAATTAAATTGATGGCTCGAATTCGAAATACTGTCCATGAAGTGATTACCCAACTTTCGTCTCAGACAAGTGTTGAGTTTGATTTAGAGATGGGAGATGGTTCGAAGATACACAAGGTTGTCGAGCGCGAGGAGTTTGAGGAAGTAAAAAAAGAAGTGTTTGAGAAGGGTGAAAGACTAATCATCCAATGCTTGCAAGATGCAAAAGTAGACGTTGAGAGTATAAATGATGTGATAATTGTAGGTGAATGTTGTAATATACCAAGGGTGAAAAATCTTGTTACTACCATATGCAAAGGAAAGGAGCTTTATAAAGGTACGGTGAATCCTTTGAATGCTGCACTTCGTGGTGCAGCAATGGCAGGAGCTAATTCTTTAGGCACTGGATTTAGGAACTTGGAGTTATTAAATTTTCATGTAACACTTCATACCATTGGAATTCGAGTTAACGGAAACAAATTTGTACCTGTGATTCCGAGGAACACGTCGAGGCCAGCAATGAGGAGTGCAGTTTTTACAACAATTCATGATTATCAAACTGAGGCGTTGATAGTTGTCTTCGAAGGTGAGGGAGAGAAGGCTGAAGAAACCCATCATTGGGGATATTACATAATAACTGAAATACCTGCAGCAACAAAAGGAGTTCCAGAAATCACTGTTTGCTTGACGATAGACCATGAAAACTGGCTCACAGTTATTGCATCGGTTAGGATGCATGGATATGAACAATATGATATTCCTGTTACTCAAGCAACGATGACATTTTTTGAAGAAGGACCGCTTTGTTTGTGTGATGATTCACTAATTAGAAGCTATGGTGATACAGCGGGTTTGGTTACTCTCTTCAACAAGGAACAATAG	1887	0.4128	MMLGDPPPSLSFKSKPLLTRCRILGGGDAMMPCCDAFFRVLHPHHLVRIVHGGRRARECFLVVVLGSSALFLLSFWRPSLSLFNPQSSLFLLVIAIFKEQRVNSFIQVLFSQKPSIHIALLIRMTEPEIAIGIDIGTSPCRVSVWKGTQEGVGRMVFLPISNFPFLMHTLDIKVRPFIATIANKACRSTTAVELLEKFLVKLKFSVEIQVKRPIRKVVFTVPVSFTRLQRTWIERASAWADLDDVELMPQPIAVALFYAQQQLQTSASSLEDMNNERKNIALVFNMDAGYCDVAVIAAEKGKLRIKALRGSPIGREDLLENMICHLLPVSKNIFKKRVHEDREIKLMARIRNTVHEVITQLSSQTSVEFDLEMGDGSKIHKVVEREEFEEVKKEVFEKGERLIIQCLQDAKVDVESINDVIIVGECCNIPRVKNLVTTICKGKELYKGTVNPLNAALRGAAMAGANSLGTGFRNLELLNFHVTLHTIGIRVNGNKFVPVIPRNTSRPAMRSAVFTTIHDYQTEALIVVFEGEGEKAEETHHWGYYIITEIPAATKGVPEITVCLTIDHENWLTVIASVRMHGYEQYDIPVTQATMTFFEEGPLCLCDDSLIRSYGDTAGLVTLFNKEQ	628

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo1g01482	628	Gene3D	-	173	197	-	-
	Mepo1g01482	628	PRINTS	70kDa heat shock protein signature	217	237	-	-
	Mepo1g01482	628	PRINTS	70kDa heat shock protein signature	450	470	-	-
	Mepo1g01482	628	PRINTS	70kDa heat shock protein signature	557	573	-	-
	Mepo1g01482	628	PRINTS	70kDa heat shock protein signature	417	433	-	-
	Mepo1g01482	628	PRINTS	70kDa heat shock protein signature	129	142	-	-
	Mepo1g01482	628	PRINTS	70kDa heat shock protein signature	476	495	-	-
	Mepo1g01482	628	Gene3D	-	273	446	-	-
	Mepo1g01482	628	SUPERFAMILY	Actin-like ATPase domain	129	259	IPR043129	-
	Mepo1g01482	628	Gene3D	Actin; Chain A, domain 4	315	398	-	-
	Mepo1g01482	628	Gene3D	Substrate Binding Domain Of DNAk; Chain A, domain 1	471	598	IPR029047	-
	Mepo1g01482	628	SUPERFAMILY	Heat shock protein 70kD (HSP70), peptide-binding domain	482	585	IPR029047	-
	Mepo1g01482	628	CDD	HSP70_NBD	131	465	-	-
	Mepo1g01482	628	Gene3D	-	198	464	-	-
	Mepo1g01482	628	Pfam	Hsp70 protein	188	592	IPR013126	GO:0005524\|GO:0140662
	Mepo1g01482	628	PANTHER	HEAT SHOCK PROTEIN 70KDA	175	584	IPR013126	GO:0005524\|GO:0140662
	Mepo1g01482	628	SUPERFAMILY	Actin-like ATPase domain	279	465	IPR043129	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo1g01482	Mepo-Chr1	14616670	14623040	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mepo1g01482	175	582	Calmodulin-binding Proteins	AT3G12580	31.068	2.34e-51	186

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo1g01482	K09489		-	gmx:100809773	468.774