Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01479 ATGGCGGCAGGGAGACAAAGTGTTTTAGGGAAGAGGGATTCTTACAATTACAAACATTGTTCCGTTAAGGAATTTGATTACTATAAGAATGATTCTGGAAAAGAGGATAGAGAAGAAGGTGAGATCCTTGTTGATGGTGATGAAATTTTGCCACCTTTGGAGAAGAGAAGAAAATTCTCTCCTGTTGTATGGGATCTGGCTGAGAAGAAGGGGAAGAACTCTTCCAAAGATTTTGTCACAAAGTCATCTGTGGATGAACAAAGTCCTGAAGGAGATGATGTTTTAAGTGGATCTTCGAAGAATTCGTCTTGTGTGGATGAAGAAAGTGATATGCAGGGATGGAACATCACGAAGTCGAAGTGGGTTTGTGATGATGATAATCTTTCACCGATGGCCGATGATGGTAAATACAAGCTCACACAGTCAAAGTGGGCTTCTGATGAACTTTCACCTATGGGTGATGATGATAAATACAAGCAACGCAGACGAAGCTCAAGTTCAGAAGTTGGTGGTAGTTCTGACAGCACAATTACTAGATCCGATGTTGATGAAGATGTTAGTGATGATTCACCATCCGAAGCTTATGAAAATAGTGGTATGATGCATGTGGAGAGGAATTTTAACATGTGTCAGAGTTGCAGATCCGTGTCTGAGTTTGAAATGATTAAGAAGATAAATGAAGGAACTTATGGTGTTGTCTATAAAGCCAAGGATAAGAAGACTGGAGAAATATTAGCATTGAAGAAGGTGAAGATGGACATGGAGAGGGAAGGCTTTCCAATTTCAGCTCTGAGAGAAATGAATATTCTCTTGTCCTTAGACCATCCCTCTATTGTTGATGTTAAAGAAGTAGTCGTGGATGACAATGACAACAATGACGGTACTTATATGGTAATGGAGCATATGCAGTATGACCTTAAGCAGTTATTGGAGTCTAAGTCGCAGCCCTTCAGTATGGGTGAGATAAAATCCTTCATGAAGCAACTTCTTGAAGGTGTCAAATATCTCCATGATAACTGGATTCTCCACCGCGATTTGAAGACATCTAACATTCTGTTGAATAAAGATGGGAAGTTGAAAATATGTGACTTTGGAATGTCAAGGCAGTATGGAAGCCCTCTGAAGCAATATACTTCTCTTGTAGTTACACTATGGTACAGAGCACCTGAACTATTGTTGGGCGCTAAAAAATACTCCAAGGCAATTGATATGTGGTCTCTTGGCTGTATAATGGCTGAATTAATTTCCAAGGAGCCACTTTTCAAGGGCAAAACTGAAGTTGAACAACTTGACAAGATTTTTCGAACTCTTGGTACACCAGATGAGAAAACATGGCCAGGATTATCCAAATTGCCTGGCTCTAAAGCAAATTTTGTTAAGCAACGGTGTAGTATGCTAAGGATGAAGTTTCCAGCCGCATCTTTCACTGGTTTGCCGGTTTTATCTGAGTCGGGATTTGACTTGTTGAATAAACTTCTAGCTTATGATCCTGATAAGAGGATATCTGCAGAAGCTGCTCTGCGACATGATTGGTTTCGTGAAGGTCCACTTCCCAGATCTGATTGCAATCCAGTTTTTTCTTCATGGTAG 1590 0.4025 MAAGRQSVLGKRDSYNYKHCSVKEFDYYKNDSGKEDREEGEILVDGDEILPPLEKRRKFSPVVWDLAEKKGKNSSKDFVTKSSVDEQSPEGDDVLSGSSKNSSCVDEESDMQGWNITKSKWVCDDDNLSPMADDGKYKLTQSKWASDELSPMGDDDKYKQRRRSSSSEVGGSSDSTITRSDVDEDVSDDSPSEAYENSGMMHVERNFNMCQSCRSVSEFEMIKKINEGTYGVVYKAKDKKTGEILALKKVKMDMEREGFPISALREMNILLSLDHPSIVDVKEVVVDDNDNNDGTYMVMEHMQYDLKQLLESKSQPFSMGEIKSFMKQLLEGVKYLHDNWILHRDLKTSNILLNKDGKLKICDFGMSRQYGSPLKQYTSLVVTLWYRAPELLLGAKKYSKAIDMWSLGCIMAELISKEPLFKGKTEVEQLDKIFRTLGTPDEKTWPGLSKLPGSKANFVKQRCSMLRMKFPAASFTGLPVLSESGFDLLNKLLAYDPDKRISAEAALRHDWFREGPLPRSDCNPVFSSW 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01479 529 FunFam Cyclin-dependent kinase G-2 304 529 - -
Mepo1g01479 529 SUPERFAMILY Protein kinase-like (PK-like) 211 517 IPR011009 -
Mepo1g01479 529 MobiDBLite consensus disorder prediction 147 200 - -
Mepo1g01479 529 MobiDBLite consensus disorder prediction 70 111 - -
Mepo1g01479 529 CDD STKc_CDC2L1 213 512 IPR045267 GO:0004674|GO:0005524|GO:0006468
Mepo1g01479 529 ProSitePatterns Serine/Threonine protein kinases active-site signature. 341 353 IPR008271 GO:0004672|GO:0006468
Mepo1g01479 529 Gene3D Transferase(Phosphotransferase) domain 1 304 519 - -
Mepo1g01479 529 MobiDBLite consensus disorder prediction 92 111 - -
Mepo1g01479 529 Gene3D Phosphorylase Kinase; domain 1 207 303 - -
Mepo1g01479 529 ProSiteProfiles Protein kinase domain profile. 219 512 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g01479 529 FunFam cyclin-dependent kinase G-2 isoform X1 204 303 - -
Mepo1g01479 529 Pfam Protein kinase domain 219 512 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g01479 529 PANTHER CELL DIVISION PROTEIN KINASE 217 518 - -
Mepo1g01479 529 MobiDBLite consensus disorder prediction 149 164 - -
Mepo1g01479 529 SMART serkin_6 219 512 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01479 Mepo-Chr1 14597158 14600606 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01479 214 524 Core Cell Cycle Gene Families AT5G10270 47.531 5.21e-93 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-PITSLRE Mepo1g01479 Pkinase 1.2e-76 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01479 K08818 - gmx:100788840 610.912