Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01473 ATGTCACCTGCACTTTATGCTAGTACCTTCAAATGTGAGGTAGATGAAAATCCATCATTAATGGGTTCTTACTATGCTTCTTTATATCCAAATTTGCCTATTTTAGAAAACAGTGCTAGTTCAACATGGATCCTTAATCCATTTTCTGATCATGAAACTGAAACCATTAGGGATCACAAGAAATTGAAAAGATCAACCGTAACTATCCCTATTTGGTTTGCAAATTTCAGCAGCCACAGTAATAGTTTCTTCAATAACATCAACAACAATAACAACAGTGTGAATAGCATTCCAAGGCTTCATTTCAGAGATCACATAAGAACTTATAAACAAAGATATTTTGCTGCTGAAGCTGTTGAAGAAGCAGCAGAAGATAACTTCAACTACAATAATTGCGAAGCTGAAGAAGATGGTTCATGTGCTGATGGAATGAGACTAGTTCAACTTCTAATTGCATGTGCTGAAGCTGTTGCGTGTCGTGACAAATCACACGCTTCGGTTTTACTATCTGAGCTTAAATCAAATGCTTTGGTGTTTGGTTCTTCATTTCAAAGAGTTGCTTCTTGTTTTGTTCAAGGACTAACAGAGAGACTAACTCTGATTCAACCAATTGGTAATAACTCTGCAGGATCAGATACAAAATCAATGATGAACATAATGGATGCTGCATCAGAAGAAATGGAAGAAGCATTCAAGTTGGTTTATGAAAATTGTCCACATATTCAATTTGGACATTTTGTGGCTAATTCTATAATATTGGAAGCCTTTGAGGGTGAGAGTTTTCTTCATGTGGTTGATCTTGGCATGAGCCTTGGTCTTCCACATGGACACCAATGGCGAGGACTAATTCAAAGTCTCGCGGATCGATCCAGCCACCGTGTTCGGCGGCTTAGGATCACAGCAGTTGGTCTATGCATTGCAAGAATCCAAGTCATTGGTGAAGAACTCTCAATTTACGCGAAAAATTTGGGGATTCATTTGGAATTCTCAATTGTCGAGAAGAATTTGGAGAATTTGAAACCTAAGGACATAAAAGTGAATGAAAAAGAGGTCCTTGTGGTTAACAGCATTCTTCAATTGCATTGTGTTGTTAAAGAGAGTCGTGGCGCTTTGAATGCTGTTTTACAAATGATACACGGTCTTTCGCCGAAAGTGTTGGTTATGGCTGAGCAAGATTCTGGTCATAATGGACCTTTTTTCCTTGGAAGGTTTATGGAATCATTGCATTATTATTCTGCTATTTTTGACTCATTGGATGCTATGCTGCCAAAGTATGACACTAAGAGGGCAAAAATGGAACAGTTTTATTTTGCTGAGGAGATAAAGAACATTGTGAGCTGTGAAGGACCATTGAGGATGGAGAGGCATGAGAAAGTGGATCAGTGGAGGAGGAGAATGAGTAGGGCTGGATTTCAAGGTTCACCTATTAAGATGGTTGTTCAAGCTAAGCAGTGGCTTGTGAAGAATAATATTTGTGATGGATATACTGTTGTGGAAGAGAAAGGGTGTTTGGTTCTTGGATGGAAATCAAAGCCTATTGTTGCAGTTTCTTGCTGGAAATGCTGA 1566 0.3863 MSPALYASTFKCEVDENPSLMGSYYASLYPNLPILENSASSTWILNPFSDHETETIRDHKKLKRSTVTIPIWFANFSSHSNSFFNNINNNNNSVNSIPRLHFRDHIRTYKQRYFAAEAVEEAAEDNFNYNNCEAEEDGSCADGMRLVQLLIACAEAVACRDKSHASVLLSELKSNALVFGSSFQRVASCFVQGLTERLTLIQPIGNNSAGSDTKSMMNIMDAASEEMEEAFKLVYENCPHIQFGHFVANSIILEAFEGESFLHVVDLGMSLGLPHGHQWRGLIQSLADRSSHRVRRLRITAVGLCIARIQVIGEELSIYAKNLGIHLEFSIVEKNLENLKPKDIKVNEKEVLVVNSILQLHCVVKESRGALNAVLQMIHGLSPKVLVMAEQDSGHNGPFFLGRFMESLHYYSAIFDSLDAMLPKYDTKRAKMEQFYFAEEIKNIVSCEGPLRMERHEKVDQWRRRMSRAGFQGSPIKMVVQAKQWLVKNNICDGYTVVEEKGCLVLGWKSKPIVAVSCWKC 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01473 521 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 116 515 IPR005202 -
Mepo1g01473 521 Pfam GRAS domain family 146 520 IPR005202 -
Mepo1g01473 521 ProSiteProfiles GRAS family profile. 137 520 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01473 Mepo-Chr1 14534977 14536837 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01473 143 521 GRAS Transcription Factor Family AT1G66350 36.292 8.39e-74 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mepo1g01473 GRAS 6.5e-108 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01473 - - gmx:100813548 731.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g01473 1 14534977 14536837 Mepo1g01473 1 14534977 14536837 ECH