Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01464 ATGGAACACTCTGAAGAAATCGATTTAGCTGCTACTGTTTCCAACGCCGAAGAACCCCAACTGGGTTCTGAGGTTCAACAATCTTCTTCACCAGTTGATCATCATTCTCCACCGTCAGATCTCAATGAAACGGTTCAAAAGAATGATGATGAACTTGCTGTGGAGCTTCATGAGAAGTTGGATTTGAAGGTTGAAGATGAAGGGGTTGTTGAAACTGATGATAAAGTTTCGAACTTTAACGATGGTGAAGTAGTTTCTGATGAAAGGGGTGCTGAAATTGATGATGAAGTTTCGAACTTTAACGATGGCGAACGAGTTGGTGATGAAAGGGGTACTGAAATTGATGATAAAGGTTCAAACTTTGATGATGGTGAACGAGTTGGTGATGAAGAATCTCTGAAGGGTGAAAAGGAAGATGAAGAAGAATCTGTTGAGGGTGAAAATGAAGAACCTATTACGGGTGAAAATGAAGAATTTGTAAAGGGTGAAGAAGGGGTTGGTGCCGATGGAGATAGCAAAGGTTGGGATACTAATAGTTGGAATGAGAATGTGAATGAAGAGCTTGGTGGTGGTAGAGATGCTGATGATTGGGGTTATGGTGGTGGTGATGATGGTGGTGCTGGTTATGGTTATGGTGCTGGATATGGGGATGGTTATGGCTATGGTGATGAGAAGGAAGAGAAAAGCAGCGATGGAACTCATCAATTCCCTTTGAGGCCTGAAGCTGAAGATTGTTCATTTTATATGAAGACTGGGAATTGCAAGTTTGGATTCAACTGCAAATTTAATCACCCCATTAGGAGGAAAAACCAAAACCAGGCTGTTAGGGAGAAGGTGCGAGAAAGAGAAGAACCAGAAGAGAACGCAGGCCAGACAGAATGCAAGTATTATCAAAGGTCTGGAGGTTGTAAGTTTGGAAAAGCTTGTAAGTACAACCACTCAAGAGGGTTCACAGCACCAATTTCAGAACTTAACTTTCTCGGCTTACCTATTCGTCTGGGAGAGAGAGAGTGCCCCTATTACATGCGCACTGGCTCTTGTAAGTTTGGGTCGAACTGTAGGTTTAATCATCCTGATCCTACAACTGTCGGAGGATCTGATCCTCAATCAGGGTATGGTAATGGAGGGTCTGTTTCACTACGAGGTGTATCACAACAACCTGTCGCCTCATGGTCTTCTTCAAGAAAGTTGAATGAAACACCTTTTGCTCCATTGATGCCTACTCCTACTCAAGGACTTGCTCCCCAAACTTCTGATTGGAATGGATATCAGGCACCTGTTTACTTATCAGAGAGGATCATGCATCCATCTTCTACTTATGTCATGAACAACCCAACAATTGAAACAAATGCTTACATGCACCATCAAAAGCAGATGCCATTTGAAGTGTTTCCAGAAAGGCCTGGTGAACCTGAATGCAGTTTTTTCATTAAAACTGGGGATTGCAAGTTCAAATCTAACTGTAAATTTCACCATCCAAAGAATCGGGTTGCAAAGTTGCCTCCTTGCAACCTTAGTGACAAGGGTCTGCCTTTGAGACCTGACCAGAGTGTCTGCTCGCACTATAGTCGTTATGGAATTTGCAAATTTGGACCAGCTTGTAGATTTGACCACCCAGAAAGCGCACTTCCCCTAATGATGCCTGGACTCGGACAGCAATCCTATGCAAACTCAGCTAACGCTCAGGTGGCTGGGATGGGTGGAAGTGCAAGTGATGCGACAATTCAACAATCTGTCTAA 1740 0.4333 MEHSEEIDLAATVSNAEEPQLGSEVQQSSSPVDHHSPPSDLNETVQKNDDELAVELHEKLDLKVEDEGVVETDDKVSNFNDGEVVSDERGAEIDDEVSNFNDGERVGDERGTEIDDKGSNFDDGERVGDEESLKGEKEDEEESVEGENEEPITGENEEFVKGEEGVGADGDSKGWDTNSWNENVNEELGGGRDADDWGYGGGDDGGAGYGYGAGYGDGYGYGDEKEEKSSDGTHQFPLRPEAEDCSFYMKTGNCKFGFNCKFNHPIRRKNQNQAVREKVREREEPEENAGQTECKYYQRSGGCKFGKACKYNHSRGFTAPISELNFLGLPIRLGERECPYYMRTGSCKFGSNCRFNHPDPTTVGGSDPQSGYGNGGSVSLRGVSQQPVASWSSSRKLNETPFAPLMPTPTQGLAPQTSDWNGYQAPVYLSERIMHPSSTYVMNNPTIETNAYMHHQKQMPFEVFPERPGEPECSFFIKTGDCKFKSNCKFHHPKNRVAKLPPCNLSDKGLPLRPDQSVCSHYSRYGICKFGPACRFDHPESALPLMMPGLGQQSYANSANAQVAGMGGSASDATIQQSV 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01464 579 MobiDBLite consensus disorder prediction 134 153 - -
Mepo1g01464 579 PANTHER PROTEIN PHOSPHATASE RELATED 101 558 - -
Mepo1g01464 579 MobiDBLite consensus disorder prediction 1 49 - -
Mepo1g01464 579 MobiDBLite consensus disorder prediction 154 170 - -
Mepo1g01464 579 MobiDBLite consensus disorder prediction 360 394 - -
Mepo1g01464 579 SUPERFAMILY CCCH zinc finger 240 267 IPR036855 GO:0046872
Mepo1g01464 579 SUPERFAMILY CCCH zinc finger 333 359 IPR036855 GO:0046872
Mepo1g01464 579 ProSiteProfiles Zinc finger C3H1-type profile. 332 360 IPR000571 GO:0046872
Mepo1g01464 579 Gene3D - 454 542 - -
Mepo1g01464 579 MobiDBLite consensus disorder prediction 73 199 - -
Mepo1g01464 579 SUPERFAMILY CCCH zinc finger 514 543 IPR036855 GO:0046872
Mepo1g01464 579 Coils Coil 130 150 - -
Mepo1g01464 579 ProSiteProfiles Zinc finger C3H1-type profile. 239 267 IPR000571 GO:0046872
Mepo1g01464 579 MobiDBLite consensus disorder prediction 73 133 - -
Mepo1g01464 579 MobiDBLite consensus disorder prediction 271 291 - -
Mepo1g01464 579 SUPERFAMILY CCCH zinc finger 292 315 IPR036855 GO:0046872
Mepo1g01464 579 ProSiteProfiles Zinc finger C3H1-type profile. 467 495 IPR000571 GO:0046872
Mepo1g01464 579 ProSiteProfiles Zinc finger C3H1-type profile. 288 316 IPR000571 GO:0046872
Mepo1g01464 579 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 243 265 IPR000571 GO:0046872
Mepo1g01464 579 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 334 358 IPR000571 GO:0046872
Mepo1g01464 579 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 291 315 IPR000571 GO:0046872
Mepo1g01464 579 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 515 540 IPR000571 GO:0046872
Mepo1g01464 579 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 469 494 IPR000571 GO:0046872
Mepo1g01464 579 MobiDBLite consensus disorder prediction 16 43 - -
Mepo1g01464 579 Gene3D - 283 366 - -
Mepo1g01464 579 ProSiteProfiles Zinc finger C3H1-type profile. 513 541 IPR000571 GO:0046872
Mepo1g01464 579 SMART c3hfinal6 288 315 IPR000571 GO:0046872
Mepo1g01464 579 SMART c3hfinal6 332 359 IPR000571 GO:0046872
Mepo1g01464 579 SMART c3hfinal6 513 540 IPR000571 GO:0046872
Mepo1g01464 579 SMART c3hfinal6 239 266 IPR000571 GO:0046872
Mepo1g01464 579 SMART c3hfinal6 467 494 IPR000571 GO:0046872
Mepo1g01464 579 SUPERFAMILY CCCH zinc finger 471 496 IPR036855 GO:0046872
Mepo1g01464 579 Gene3D - 220 277 - -
Mepo1g01464 579 MobiDBLite consensus disorder prediction 271 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01464 Mepo-Chr1 14478259 14482389 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01464 464 564 C2H2 Transcription Factor Family AT3G02830 44.118 2.12e-22 97.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Mepo1g01464 zf-CCCH 2e-08 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01464 - - tpra:123882932 824.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g01464 1 14478259 14482389 Mepo3g05765 3 71840364 71844339 ECH
Mepo1g01464 1 14478259 14482389 Mepo1g01464 1 14478259 14482389 ECH
Mepo1g01464 1 14478259 14482389 Mepo3g05765 3 71840364 71844339 PCT