Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01448 ATGGAGATGGAACGCGTCTTCGAATTTCCTCACACTCACATGGATCGTCGACCAAGGAAGAGAGCGAGGTTGGGTTGGGATGTTCCTGAAACCCCAAAGGCTCAGGTAGAATTGTTTTTTGGACAAGAGCTTGGGAATTTTTCAAGCTATGCTCCTTCAGGGGTTCCCTCGGAACACACCACTAGTTCTCTATCTGTTAAGGGTGTTGCTCGAAATGGTTCTCCCCCTTGGCGAGATGATGACAAAGATGGCCATTACACTTTTGCTGTTGGAGAAAATTTAACTTCCCGCTATAAGATCCACAGCAAAATGGGGGAAGGAACTTTTGGGCAGGTATTGGAATGCTGGGACAGAGAAAGGAAGGAAATGGTTGCCATTAAAATTGTCCGTGGAATAAAAAAATATCGTGAAGCAGCGATGATAGAAATTGAGATGTTGCAACAGCTTGGTAAACATGATATAGGTGGCAATCGTTGTGTGCAAATACGGAACTGGTTTGACTATCGTAATCATATATGTATTGTCTTTGAGAAACTTGGACCAAGCTTATACGATTTTCTTCGGAAAAACAATTATCGCTCATTTCCCATTGATCTTGTCCGTGAGATTGGCAGACAACTATTGGAATGTATAGCATTTATGCATGATTTGCGCATGATCCATACTGACCTAAAGCCTGAAAACATACTCCTTGTTTCACCAGACTATGTCAAAGTTCCTGACTACAAGATTTCATCGAGGTCACCAAACTCGTATTTCAAGAAAGTGCCCAAGTCTAATGCTATCAAGGTTATTGATTTTGGAAGCACCACATATGAGCGAGTAGATCAGAGTTATATTGTCTCAACTCGTCATTATAGAGCACCTGAAGTCATCCTTGGTCTTGGCTGGAGCCATCCATGCGATATATGGAGCGTGGGTTGTATATTGGTCGAGTTATGCACGGGCGAAGCTTTGTTTCAGACTCATGAAAATTTAGAGCACCTTGCCATGATGGAGAGGGTACTTGGTCCACTACCAATGCATATGTTGAAGAGAGTCGACCGACATGCTGAGAAGTATGTCAGAAGAGGTAAATTGGACTGGCCAGTGGGTGCAACCTCGAGGGAGAGTATTAAAGCTGTAATGAAGCTCCCTAGACTACAGAATCTAATAATGCAGCATGTTGATCATTCAGCTGGTGATCTCATACATCTGTTGCAAGGGCTACTTAGATATGACCCCTCTGAAAGAATCACAGCCAAGGAAGCCCTCAGACATTCCTTTTTTATGAGGAGATCACATTAG 1287 0.4305 MEMERVFEFPHTHMDRRPRKRARLGWDVPETPKAQVELFFGQELGNFSSYAPSGVPSEHTTSSLSVKGVARNGSPPWRDDDKDGHYTFAVGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEMLQQLGKHDIGGNRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNNYRSFPIDLVREIGRQLLECIAFMHDLRMIHTDLKPENILLVSPDYVKVPDYKISSRSPNSYFKKVPKSNAIKVIDFGSTTYERVDQSYIVSTRHYRAPEVILGLGWSHPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPMHMLKRVDRHAEKYVRRGKLDWPVGATSRESIKAVMKLPRLQNLIMQHVDHSAGDLIHLLQGLLRYDPSERITAKEALRHSFFMRRSH 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01448 428 FunFam Serine/threonine-protein kinase AFC2 174 423 - -
Mepo1g01448 428 SUPERFAMILY Protein kinase-like (PK-like) 85 424 IPR011009 -
Mepo1g01448 428 MobiDBLite consensus disorder prediction 51 69 - -
Mepo1g01448 428 ProSitePatterns Serine/Threonine protein kinases active-site signature. 219 231 IPR008271 GO:0004672|GO:0006468
Mepo1g01448 428 ProSiteProfiles Protein kinase domain profile. 98 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g01448 428 MobiDBLite consensus disorder prediction 51 77 - -
Mepo1g01448 428 CDD PKc_CLK 85 423 - -
Mepo1g01448 428 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 1 425 - -
Mepo1g01448 428 Pfam Protein kinase domain 98 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g01448 428 SMART serkin_6 98 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g01448 428 FunFam Serine/threonine-protein kinase AFC2 85 178 - -
Mepo1g01448 428 Gene3D Phosphorylase Kinase; domain 1 85 178 - -
Mepo1g01448 428 Gene3D Transferase(Phosphotransferase) domain 1 152 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01448 Mepo-Chr1 14270997 14275241 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01448 263 423 EF-hand Containing Proteins AT5G22840 30.899 3.43e-16 78.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Mepo1g01448 Pkinase 5.7e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01448 K08287 - gmx:100804452 811.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g01448 1 14270997 14275241 Mepo1g01448 1 14270997 14275241 ECH