Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01429 ATGGAATCAAACCCCAAAAATACTATCAAGTTCCTCTTTAGCTACGGCGGAAAAATTCTCCCCCGCCTCACCGACGGCAAGCTCCGCTACACCGGTGGCCACACCAGAGTCCTTGCTCTCCCTCCACCCATTTCTTTCTCAGAGTTGATGGTGAAGCTTGTTGAGTTATGCGGTTCATCAGTCACACTGAAATGTCCATTACCAAACGGAGATTTAGAGACATTGATTTCAATCACCAGTGATGAAGATTTGAAGAACATAATTGAAGAATACAACCGAGCTTCTTCATCATTAACTCATCCATTGAAGATCAGAGCCATTCTTTCACCGCCCAAGAAGTTATCTCCTCCTCCGTCTTCTTCGGCCAGCTCAACTCACTCTCCCTCCGGTTCGGTTTATGCATCCGTGGAATCACCACCGTATGCGGTGGAAAATCGGCTTAACCGCCTGAATTGCTCACAGGTTCCGCTTGGTATTCGGAATTGGGGTGTGAAAGGTAGCTGTTACACAAGGCAATTAGATGGAAGCCCTAGATTCCTTTACCGGTTCGCAAATAATTATTGTCATTGA 570 0.4632 MESNPKNTIKFLFSYGGKILPRLTDGKLRYTGGHTRVLALPPPISFSELMVKLVELCGSSVTLKCPLPNGDLETLISITSDEDLKNIIEEYNRASSSLTHPLKIRAILSPPKKLSPPPSSSASSTHSPSGSVYASVESPPYAVENRLNRLNCSQVPLGIRNWGVKGSCYTRQLDGSPRFLYRFANNYCH 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01429 189 SMART PB1_new 23 111 IPR000270 GO:0005515
Mepo1g01429 189 SUPERFAMILY CAD & PB1 domains 25 113 - -
Mepo1g01429 189 MobiDBLite consensus disorder prediction 118 133 - -
Mepo1g01429 189 Pfam PB1 domain 25 96 IPR000270 GO:0005515
Mepo1g01429 189 PANTHER OS05G0427100 PROTEIN-RELATED 3 128 - -
Mepo1g01429 189 MobiDBLite consensus disorder prediction 109 133 - -
Mepo1g01429 189 CDD PB1_UP2 14 108 - -
Mepo1g01429 189 Gene3D - 27 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01429 Mepo-Chr1 14102919 14104428 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01429 7 90 MAP Kinase Kinase Kinase AT2G35050 51.190 4.38e-23 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01429 - - mtr:25493721 279.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g01429 1 14102919 14104428 Mepo1g01429 1 14102919 14104428 ECH
Mepo1g01429 1 14102919 14104428 Mepo3g05812 3 72322452 72326099 PCT