Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01421 ATGGGTCGCCATTCATGTTGTTTAAAGCAAAAATTGAGGAAAGGTTTATGGTCCCCTGAAGAAGATGAAAAGCTTTTCAATCACATAACTAGATTTGGTGTTGGTTGCTGGAGTTCTGTTCCTAAACAAGCTGGACTTCAAAGATGTGGTAAGAGTTGTAGATTGAGATGGATAAACTATTTGAGGCCTGATTTAAAGAGAGGAATGTTCTCACAACAAGAAGAAGATCTTATAATCAGTCTTCATGAAGTCCTTGGAAATAGGTGGGCTCAAATAGCAGCACAATTACCAGGGAGAACAGATAATGAAATAAAAAACTTTTGGAATTCATGTTTAAAGAAGAAGCTTCTAAAGCAAGGGATTGATCCAACAACACACAAGCCTCTTACAGAAGCATATCTTAAAGAAGAGAACAAAATCACAGAAACAACAGCACAACCTATGCAAATACCATCAGTTACATCACATGGTTCAGCATTTCTAATAACCGACTCGAGTTACTATGATGACAATGGCTTAACAGAAGCTTCAAGAGAAATTTTCACCAGCAAACAAGCATTTGACCCTTTGTTCTGCTATGATTTCCAATCTGGTTACAACTTACCTATGAGTAATTATCACACAAGCCTTAAACCATGTGATCAGAGTCAATTCGGACTTAATTCAAGCTATGGATTCACTTCAATACCGAGTCTAACAAATTCAGATCACGCGAATCTGTCAGTGACAGAGTTTTCAGACAACAATTCAGCTTCAAAAATCAGTTCATTCTTCATGAATGATCAAGTGAAAGAAAGCAATTCAAGCAATAGCTCAAATATGAGTACTATTTATCCATCTAAAATGAGAAATACTGTGATGGAAAATAATAATGCAGGGTTTTGTTGGGATGGATCAGAAAACAAATTAGACCCTTTGTTTCAGTTCCAAGTAAATGCTATAAAATCTGAAGATTATGGAACAAGTTCATGGGAAGATGGACAACTTCAAACTCACAATTCAATAGAAGATTTCAATAGCTATCCATTAACATCACTTTCAGAAGATTTAACAGAAGCAAATTTTGATGTCTTCCATCATATATGA 1086 0.3545 MGRHSCCLKQKLRKGLWSPEEDEKLFNHITRFGVGCWSSVPKQAGLQRCGKSCRLRWINYLRPDLKRGMFSQQEEDLIISLHEVLGNRWAQIAAQLPGRTDNEIKNFWNSCLKKKLLKQGIDPTTHKPLTEAYLKEENKITETTAQPMQIPSVTSHGSAFLITDSSYYDDNGLTEASREIFTSKQAFDPLFCYDFQSGYNLPMSNYHTSLKPCDQSQFGLNSSYGFTSIPSLTNSDHANLSVTEFSDNNSASKISSFFMNDQVKESNSSNSSNMSTIYPSKMRNTVMENNNAGFCWDGSENKLDPLFQFQVNAIKSEDYGTSSWEDGQLQTHNSIEDFNSYPLTSLSEDLTEANFDVFHHI 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01421 361 Gene3D - 69 143 - -
Mepo1g01421 361 Gene3D - 11 67 - -
Mepo1g01421 361 CDD SANT 70 109 IPR001005 -
Mepo1g01421 361 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mepo1g01421 361 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Mepo1g01421 361 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Mepo1g01421 361 CDD SANT 17 61 IPR001005 -
Mepo1g01421 361 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mepo1g01421 361 SMART sant 66 114 IPR001005 -
Mepo1g01421 361 SMART sant 13 63 IPR001005 -
Mepo1g01421 361 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mepo1g01421 361 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Mepo1g01421 361 FunFam Transcription factor MYB86 69 137 - -
Mepo1g01421 361 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Mepo1g01421 361 FunFam MYB transcription factor 11 67 - -
Mepo1g01421 361 PANTHER MYB DOMAIN PROTEIN 55 1 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01421 Mepo-Chr1 14047728 14049504 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01421 1 200 MYB Transcription Factor Family AT4G01680 61.722 1.54e-81 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mepo1g01421 Myb_DNA-binding 8e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01421 K09422 - gmx:100811140 550.821