Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01419 ATGGCATCATCATCCAGCGCATACAATTCACCTTGTGCTGCCTGCAAATTCTTGAGGAGAAAATGCATGCCAGGTTGCATCTTTGCACCTTACTTCCCTCCAGAAGAGCCTCAAAAATTTGCAAACGTGCACAAAATATTTGGTGCTAGCAATGTCACAAAGCTTCTCAACGAACTCCTCCCTCACCAAAGGGAAGATGCAGTTAACTCACTTGCTTACGAAGCCGAAGCACGAGTTAGGGATCCAGTTTATGGATGTGTAGGAGCCATCTCTTTTCTACAAAGACAAGTTCAAAGGCTTCAAAAGGAACTCGACGCTGCTAACACCGATCTTCTTCGCTATTCCCTCGCTGATATCTCTCCTCCTCCTCCAGCCTCTCTTTCTGTGCCTCAAGGAATGATATCAGTTCAACCAATTCCACAAAGACAGTTTAGTGGAAGAAATGAAGGGTTTTATAGACAATCTCCTACTACTACTTATTCATCTTTTCCTTATTCTCTTCCTTGGACTGATACTTCCACGGTGGATATGAGTGAAGGTGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAATCATATGTGA 585 0.4479 MASSSSAYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPHQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANTDLLRYSLADISPPPPASLSVPQGMISVQPIPQRQFSGRNEGFYRQSPTTTYSSFPYSLPWTDTSTVDMSEGGGGGGGGGGGGNHM 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01419 194 MobiDBLite consensus disorder prediction 174 194 - -
Mepo1g01419 194 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 9 131 - -
Mepo1g01419 194 Coils Coil 90 117 - -
Mepo1g01419 194 ProSiteProfiles LOB domain profile. 10 111 IPR004883 -
Mepo1g01419 194 Pfam Lateral organ boundaries (LOB) domain 11 107 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01419 Mepo-Chr1 14028669 14029253 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01419 1 171 AS2 family AT5G63090 67.598 8.57e-80 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mepo1g01419 LOB 3.1e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01419 - - mtr:25493732 355.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g01419 1 14028669 14029253 Mepo3g05818 3 72437840 72439544 ECH
Mepo1g01419 1 14028669 14029253 Mepo1g01419 1 14028669 14029253 ECH
Mepo1g01419 1 14028669 14029253 Mepo3g05818 3 72437840 72439544 PCT