Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01380 ATGAAGGAAACTAGTGATGGGTTTGTAAGAGCAGATCAGATTGATCTGAAAAGCATCGATGAACAGCTTGAAAGACATCTCAACAAGGTGTTGACTATTGATAAGAAAAAGCGCGTTGAAGAAGAAGATTCTTCTGCTGCTTCTGCTTCTGTTTTTGATCATGTTCGTGTTCATACCAGCAGTGCCAATACTTCTCCTACATCTATTAAGTTCAAAACTAACTTCAAGAAGCAAAAACAGGATTGGGAAATTGATCCTTCTAAACTTATCATCAAAAGTGTTATTGCACGTGGCACTTTTGGCACTGTTCATCGTGGTGTTTATGATACTCAAGATGTTGCTGTTAAATTGCTTGACTGGGGTGAAGAAGGTCAAAGGACAGAAGCTGAGGTTTCCTCATTGAGGGCAGCGTTTATACAGGAAGTTGCTGTTTGGCATAAACTTGATCATCCCAATGTCACAAAGTTTATTGGAGCAACTATGGGATCTGCAGAATTGCAGATTCAAACTGATACTGGTCTAATTGGCATGCCAAGCAATATCTGTTGTGTTGTTGTGGAGTATCTTGCTGGAGGTACACTGAAATCATATCTAATAAAGAACAGGAGGAGGAAATTAGCTTTTAAGGTTGTCATCCAGCTGGTGCTTGATTTAGCAAGAGGGTTGAGTTATCTTCACTCTCAGAAGATTGTTCACAGAGATGTGAAGACCGAAAACATGCTGTTGGATAAGACCCGCACAGTTAAAATTGCTGATTTTGGGGTTGCACGAGTCGAGGCGTCAAATCCTAATGATATGACTGGGGAGACCGGAACCCTTGGTTATATGGCTCCAGAGGTTTTAAATGGAAACCCCTATAACAGGAAATGTGATGTGTACAGTTTTGGTATCTGTTTATGGGAGACATATTGTTGTGACATGCCATATCCTGACCTAAGTTTCTCAGAGATTACTTCAGCTGTTGTTCGCCAGAATTTGAGACCAGAAATACCAAGATGCTGCCCAAGTTCTCTTGCGAACGTAATGAGGAAATGCTGGGATGCCAGTCCTGATAAGCGGCCAGAGATGGACGAGGTAGTTACCATGCTGGAGGCCATTGACACATCCAAAGGCGGAGGTATGATCCCTATTGATCAGCAACAGGGTTGTTTTTGCTTCCGCAAGCATAGAGGACCATGA 1179 0.4215 MKETSDGFVRADQIDLKSIDEQLERHLNKVLTIDKKKRVEEEDSSAASASVFDHVRVHTSSANTSPTSIKFKTNFKKQKQDWEIDPSKLIIKSVIARGTFGTVHRGVYDTQDVAVKLLDWGEEGQRTEAEVSSLRAAFIQEVAVWHKLDHPNVTKFIGATMGSAELQIQTDTGLIGMPSNICCVVVEYLAGGTLKSYLIKNRRRKLAFKVVIQLVLDLARGLSYLHSQKIVHRDVKTENMLLDKTRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWETYCCDMPYPDLSFSEITSAVVRQNLRPEIPRCCPSSLANVMRKCWDASPDKRPEMDEVVTMLEAIDTSKGGGMIPIDQQQGCFCFRKHRGP 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01380 392 SUPERFAMILY Protein kinase-like (PK-like) 61 363 IPR011009 -
Mepo1g01380 392 SMART serkin_6 89 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g01380 392 Pfam Protein tyrosine and serine/threonine kinase 91 363 IPR001245 GO:0004672|GO:0006468
Mepo1g01380 392 Gene3D Phosphorylase Kinase; domain 1 69 172 - -
Mepo1g01380 392 ProSiteProfiles Protein kinase domain profile. 89 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g01380 392 ProSitePatterns Serine/Threonine protein kinases active-site signature. 230 242 IPR008271 GO:0004672|GO:0006468
Mepo1g01380 392 PRINTS Tyrosine kinase catalytic domain signature 290 312 IPR001245 GO:0004672|GO:0006468
Mepo1g01380 392 PRINTS Tyrosine kinase catalytic domain signature 186 199 IPR001245 GO:0004672|GO:0006468
Mepo1g01380 392 PRINTS Tyrosine kinase catalytic domain signature 224 242 IPR001245 GO:0004672|GO:0006468
Mepo1g01380 392 PRINTS Tyrosine kinase catalytic domain signature 334 356 IPR001245 GO:0004672|GO:0006468
Mepo1g01380 392 CDD STKc_MAP3K-like 95 363 - -
Mepo1g01380 392 FunFam Serine/threonine-protein kinase HT1 189 374 - -
Mepo1g01380 392 PIRSF ILK 17 372 - -
Mepo1g01380 392 FunFam Kinase suppressor of Ras 1 78 172 - -
Mepo1g01380 392 Gene3D Transferase(Phosphotransferase) domain 1 190 381 - -
Mepo1g01380 392 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 44 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01380 Mepo-Chr1 13623364 13628747 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01380 1 324 MAP Kinase Kinase Kinase AT5G50000 77.607 0.0 533
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Mepo1g01380 PK_Tyr_Ser-Thr 3.6e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01380 - - gmx:100807921 707.597