Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01369 ATGGCAGCATCTCCGTCCCCTCAACCACCTCACGCTGTGTTTCAAACTCTTCCTATTGATGGCAGTATCAGTGATGAGAAAGTAACAACAACTTCTTCACCAATAAGCAGAATCAGTCCAGTTATTTTGCTGGTTATAATAGTACTAGCAATTATCTTCTTTCTTTATGGACTTATCCAATTAATTATATGGCTTGTGATAAAAAGGCCATCCTCTTCATCTCATTATAATTCCAATAGATTCCAAGAATCCACCCGAACCCGTGCACTTCAGAGGCAACTACAAAACCTATTCCATTTACATGATTCAGGTCTAGAACAATCTCTCATAGATACTCTTCCTGTTTTCAAGTACCAAGATTTATTTGGTTTGAAGGAACCCTTTGATTGTGCTGTGTGTCTATGTGAGTTTTCTGAGCAGGAGAAGCTGAGGTTGGTTCCTGTGTGTAGCCATGCTTTTCATATGAATTGTCTTGACACATGGCTTCTCTCAAATTCTACTTGTCCTCTTTGTAGAGCAAACATCTCTAGCTCTAGTTTTCCTTTGGAGAATGTTGATGATTCTTTGGTTAGTCAAAGAGAAATAGTTGTAGAAGAAGAAAAAGTTGGGAAAAGGGTGTTTTCTGTGAGACTTGGAAAGTTCAGAAATAATGGATTGGAGGATGGTAGTAGTCGTAGTTTGGATGAGAGGAGATGTTATTCAATGGGTTCATGTCAGTATCATGTTCTTGGTGATTCAAATTTGCAAGTGGTTTTGTCTCAATCTTGTTGTGATGATGATGACTTGGGAAGTGAAGATAGTGGGAATGTGGAGGGGAAGAGGATAGGGAACAGAACCAAAGGTGAGAGTTTTTCTGTTTCTAAGATATGGCTTTGGTCTAAGAAGAGCAAATTTACTAGCTCTAATGTTGATTTTCCTTGA 921 0.3865 MAASPSPQPPHAVFQTLPIDGSISDEKVTTTSSPISRISPVILLVIIVLAIIFFLYGLIQLIIWLVIKRPSSSSHYNSNRFQESTRTRALQRQLQNLFHLHDSGLEQSLIDTLPVFKYQDLFGLKEPFDCAVCLCEFSEQEKLRLVPVCSHAFHMNCLDTWLLSNSTCPLCRANISSSSFPLENVDDSLVSQREIVVEEEKVGKRVFSVRLGKFRNNGLEDGSSRSLDERRCYSMGSCQYHVLGDSNLQVVLSQSCCDDDDLGSEDSGNVEGKRIGNRTKGESFSVSKIWLWSKKSKFTSSNVDFP 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01369 306 SUPERFAMILY RING/U-box 109 177 - -
Mepo1g01369 306 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 105 179 IPR013083 -
Mepo1g01369 306 CDD RING-H2_EL5-like 129 172 - -
Mepo1g01369 306 FunFam E3 ubiquitin-protein ligase ATL6 93 178 - -
Mepo1g01369 306 Pfam Ring finger domain 129 172 IPR001841 -
Mepo1g01369 306 SMART ring_2 130 171 IPR001841 -
Mepo1g01369 306 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 34 290 - -
Mepo1g01369 306 ProSiteProfiles Zinc finger RING-type profile. 130 172 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01369 Mepo-Chr1 13565876 13567281 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01369 29 297 C3H Transcription Factor Family AT2G18650 40.120 1.82e-48 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01369 - - mtr:11408711 543.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g01369 1 13565876 13567281 Mepo1g01369 1 13565876 13567281 ECH