Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01340 ATGGCTGCCGCCGGCGAGATTTTCCGGTCTAATTTGACGGAGTTGATGGAGGAATCACCTTCAGGTGCAGGTGAATTGCATGTCCTTGCTGTTGATGATAGTCTTGTTGATCGTAAGGTGATTGAACGTTTGTTGAAGATTTCTTCATGCAAAGTTACGGTTGTTGAGAGTGCAAGAAGAGCTCTTCAGTTTTTGGGATTGGATGGAGAGAACAGTGATGTTGGATTTGATGGTTTGAAGGTTAATTTGATAATGACGGATTATTCCATGCCGGGGATGACAGGATATGAATTACTCAAGAAAATCAAGCAGGAGTCTTCTGTTTTTAGAGAGATTCCAGTGGTGATCATGTCGTCGGAGAATGTTTTGACTCGAATTGATAGATGCTTGGAAGAAGGAGCAGAAGATTTTCTGTTGAAGCCAGTCAAATTGTCAGATGTAAGACGCCTGAAAGATTTCATCATGAGAGGTGAAGTGAAGGATGGTGAGAGATGTTCTCTCAAAAGAATGCGATCATCAGATGATTGTCATCCGTCTCTATCAACTACATTCTCACCAATGCGTCATTCATGTGATCCACCATCGTCAGTGTTCTCACCACTCTCACCATCAACATTATCCTCTAAGAAATCTAGATTGTGA 642 0.419 MAAAGEIFRSNLTELMEESPSGAGELHVLAVDDSLVDRKVIERLLKISSCKVTVVESARRALQFLGLDGENSDVGFDGLKVNLIMTDYSMPGMTGYELLKKIKQESSVFREIPVVIMSSENVLTRIDRCLEEGAEDFLLKPVKLSDVRRLKDFIMRGEVKDGERCSLKRMRSSDDCHPSLSTTFSPMRHSCDPPSSVFSPLSPSTLSSKKSRL 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01340 213 Gene3D - 26 178 - -
Mepo1g01340 213 SMART REC_2 26 151 IPR001789 GO:0000160
Mepo1g01340 213 CDD REC_typeA_ARR 28 150 - -
Mepo1g01340 213 SUPERFAMILY CheY-like 25 151 IPR011006 -
Mepo1g01340 213 Pfam Response regulator receiver domain 28 148 IPR001789 GO:0000160
Mepo1g01340 213 ProSiteProfiles Response regulatory domain profile. 27 155 IPR001789 GO:0000160
Mepo1g01340 213 PANTHER TWO-COMPONENT RESPONSE REGULATOR 26 168 IPR045279 GO:0009736
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01340 Mepo-Chr1 13254916 13257159 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01340 5 180 Response Regulator Gene Family AT3G48100 66.480 3.31e-77 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mepo1g01340 Response_reg 1.2e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01340 K14492 - gmx:100527518 298.901