Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01331 ATGTCTTCTGCTTCAACCACCGCAGACTCCACCGTCTCCGGCGAATTCATGCTCTTCGGAGTTAGAGTCGTCGTTGATTCTATGAGAAAGAGTGTCAGTATGAACAATCTCTCACAATACGAACAACCTCAAGACAACAACAACATCATCAAGGATGATAATATCAACAAAGACGTTATCACCGCCGGTTACGCCTCCGCCGATGACGCCGTTCCTCAAAACTCCGCCAGAAACCGCGACCGCGAACGTAAACGAGGGATTCCGTGGACGGAGGAAGAGCACAAGCTGTTCTTGGTTGGATTGCAGAAAGTTGGAAAAGGTGATTGGAGAGGAATCTCAAGGAACTATGTGAAAACAAGAACGCCTACACAGGTTGCAAGCCATGCTCAAAAGTACTTTCTCCGCCGAAGTAATCTCAATCGCCGTCGCCGTAGATCCAGCCTCTTTGATATCACCACCGACACGGTATCTGCAATTCCAATGGAGGAAGAACAGGTCAAGAATCAAGATAATGTTTCACAGTTACAGCCACAGTGCCCTGCAGCCCCCGAAGCTAGAAAAATCAATGGATTTCCGTTTATGTCAGTATATGAGTTGGGTGTTAATGAGAGTACTCCAATGGAAGAACTCACTCTTGGACAAGGAAATGTGAAACACAATTTCCAACCCAACAATCTATTCAATCCAATTCCTTTTGTTGTTTCAGATCCCAAAGCTTCCATTGTGTCTGATAACACATCTAGTTCCAGTTCATCCATTGACCCTCCAACACTTTCCCTTGGACTTTCCTTCTCGTCCGATCAAAGGAAGACATCATCATCAACACATTTACATGCAATGCCATGTTTCAAAAATGGAGACAACATCATAAGTGTTGCTTAA 882 0.4478 MSSASTTADSTVSGEFMLFGVRVVVDSMRKSVSMNNLSQYEQPQDNNNIIKDDNINKDVITAGYASADDAVPQNSARNRDRERKRGIPWTEEEHKLFLVGLQKVGKGDWRGISRNYVKTRTPTQVASHAQKYFLRRSNLNRRRRRSSLFDITTDTVSAIPMEEEQVKNQDNVSQLQPQCPAAPEARKINGFPFMSVYELGVNESTPMEELTLGQGNVKHNFQPNNLFNPIPFVVSDPKASIVSDNTSSSSSSIDPPTLSLGLSFSSDQRKTSSSTHLHAMPCFKNGDNIISVA 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01331 293 SUPERFAMILY Homeodomain-like 83 138 IPR009057 -
Mepo1g01331 293 NCBIfam myb-like DNA-binding domain, SHAQKYF class 84 135 IPR006447 GO:0003677
Mepo1g01331 293 PANTHER TRANSCRIPTION FACTOR KUA1 11 238 - -
Mepo1g01331 293 Gene3D - 87 139 - -
Mepo1g01331 293 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 81 137 IPR017930 -
Mepo1g01331 293 FunFam transcription factor MYB1R1 87 138 - -
Mepo1g01331 293 CDD SANT 88 133 IPR001005 -
Mepo1g01331 293 ProSiteProfiles SANT domain profile. 89 137 IPR017884 -
Mepo1g01331 293 SMART sant 85 135 IPR001005 -
Mepo1g01331 293 MobiDBLite consensus disorder prediction 66 85 - -
Mepo1g01331 293 ProSiteProfiles Myb-like domain profile. 81 133 IPR001005 -
Mepo1g01331 293 Pfam Myb-like DNA-binding domain 88 133 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01331 Mepo-Chr1 13135111 13137264 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mepo1g01331 Myb_DNA-binding 1.5e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01331 - - psat:127073868 448.358