Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01327 ATGGCTTCCTCCAATCTCACCAACCTCACCATTCCACCAATTTCATCATCTTCTTCTTCTTCTCGTCCCTTCAATGATTCCAACCCATCTCCTTCCACCAGCCCACAAGTTATACACAGTAGGTCCCACTCCTTCGTCGGTCCCTCCCCTCGCTTCCCTCCTCCACCCTCCGACAACAACTCCCTCTTCTTCCTCGACGAACTCACTTCCAACAGCGACGAAGAAGAAGAAGAAAATGAAATTCAACAACCCCTTCAATACAAATTCGGTCCCGCAGATTTCCAAATTCTCAGAGTTGTAGGACAAGGTGCCTTTGGCAAAGTCTTCATGGTCAGGAAAAAAACTGCAGATTCAGGTTCTTCAAACGGTAACGGAATATTCGCGATGAAGGTTATGAGAAAAGACAACATCATTAAGAAAAATCATGTTGATTATATGAAAGCTGAAAGAGATATTCTTACTAAAGTTCTTCATCCTTTCATTGTTCCTCTTCGCTACTCTTTCCAAACTAAATCTAAATTATATTTGATTTTGGACTTTATAAATGGTGGCCATCTTTTTTTTCATTTATGTCGACAAGGCATTTTTAGTGAGGATGAGGCAAGGATTTACACTGCTGAGATTGTATCCGCTGTTTCACATCTTCACAGTAAAGGCATCGTGCATCGAGATCTTAAACCCGAAAACATACTCATGGATTCTCATGGCCATGTGATGTTAACTGATTTTGGAATGTCGAAAGAGATTGAGGAATCTGAGAGATCTAACTCAATGTGTGGGACTACTGAATATATGGCTCCGGAAATCCTTCTGGGTAAAGGACATAACAAGGATGCGGATTGGTGGAGTGTTGGTGCTCTCTTGTATGAAATGATAACAGGAAAGGCACCATTTACACATACCAACAGAAAGAAGCTACAGGAGAAAATTATTAAAGAGAAAGTTAAATTTCCACCGTACCTTACCAGTGACGCTCATTCTTTGCTCAAAGGATTGCTGCAAAAGGATCCATCGACAAGGTTAGGCAGTGGGCCAAATGGAGATGAGCAGATAAAAAATCATAAATGGTTTAAGTCAATCAATTGGACCAAATTGGAGGCAAGAGAAGTGCAACCCAAGTTTAAACCAGCTGATGTGGCTGGAAAAGAGTGCACGGCTAATTTTGATCGATGCTGGACAACAATGCCTCTCGAGGACTCACCAGCATCAACTCCTACAGCAGGTGACCATTTTCAGGGCTATACTTATGTCGCACCAAATCCTTGGCTTTCTTCTAGATAA 1281 0.4184 MASSNLTNLTIPPISSSSSSSRPFNDSNPSPSTSPQVIHSRSHSFVGPSPRFPPPPSDNNSLFFLDELTSNSDEEEEENEIQQPLQYKFGPADFQILRVVGQGAFGKVFMVRKKTADSGSSNGNGIFAMKVMRKDNIIKKNHVDYMKAERDILTKVLHPFIVPLRYSFQTKSKLYLILDFINGGHLFFHLCRQGIFSEDEARIYTAEIVSAVSHLHSKGIVHRDLKPENILMDSHGHVMLTDFGMSKEIEESERSNSMCGTTEYMAPEILLGKGHNKDADWWSVGALLYEMITGKAPFTHTNRKKLQEKIIKEKVKFPPYLTSDAHSLLKGLLQKDPSTRLGSGPNGDEQIKNHKWFKSINWTKLEAREVQPKFKPADVAGKECTANFDRCWTTMPLEDSPASTPTAGDHFQGYTYVAPNPWLSSR 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01327 426 FunFam Non-specific serine/threonine protein kinase 181 376 - -
Mepo1g01327 426 MobiDBLite consensus disorder prediction 1 63 - -
Mepo1g01327 426 MobiDBLite consensus disorder prediction 1 43 - -
Mepo1g01327 426 Pfam Protein kinase domain 94 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g01327 426 SMART pkinase_C_6 358 418 IPR000961 GO:0004674|GO:0005524|GO:0006468
Mepo1g01327 426 Pfam Protein kinase C terminal domain 379 416 IPR017892 GO:0004674|GO:0005524|GO:0006468
Mepo1g01327 426 ProSiteProfiles Protein kinase domain profile. 94 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g01327 426 SMART serkin_6 94 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g01327 426 ProSiteProfiles AGC-kinase C-terminal domain profile. 358 426 IPR000961 GO:0004674|GO:0005524|GO:0006468
Mepo1g01327 426 ProSitePatterns Serine/Threonine protein kinases active-site signature. 220 232 IPR008271 GO:0004672|GO:0006468
Mepo1g01327 426 Gene3D Transferase(Phosphotransferase) domain 1 181 376 - -
Mepo1g01327 426 SUPERFAMILY Protein kinase-like (PK-like) 81 380 IPR011009 -
Mepo1g01327 426 ProSitePatterns Protein kinases ATP-binding region signature. 100 130 IPR017441 GO:0005524
Mepo1g01327 426 Gene3D Phosphorylase Kinase; domain 1 92 401 - -
Mepo1g01327 426 FunFam Non-specific serine/threonine protein kinase 92 201 - -
Mepo1g01327 426 PANTHER RIBOSOMAL PROTEIN S6 KINASE 45 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01327 Mepo-Chr1 13108317 13112386 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01327 35 419 AGC Kinase Gene Family AT3G08720 60.442 4.54e-175 496
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC-Pl Mepo1g01327 Pkinase 2e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01327 K04688 - gmx:100798259 617.846