Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01315 ATGGGAGGAGGAGATCCTTCCTTATCGGATATGGAGGAAGAGGAGGAGGAAAACGATGTGATGGTGAACGATTCAGTTGACATTCTTTCCCGTTTTCGAATCTTCGATGCTCCTATACTCCTCTTCGTTTGTTTTCATAAAGCTCTCCGTTCTGAACTTGATCATCTTCGTTCGTTTGCTGAAATGGCGTCGTCCTTGGAACATGATCCGCATAGTTGCCGAGAAATTATTGTTAAGCTTCAACACAGATTTCAGTTTCTTAAACTTGCTTTTAAGTATCATTGCGCTGCTGAAGATGAGATCATCTTCCATGCACTGGATATGCATGTAAAAAATGTTGTATGTACATATTCCCTAGAGCATAACAGCACCAATGTGCTGTTTGATTCTATCTTACACTTCTTGGATGAGTTGATGAGCTGTAGTGAGAACATTTCCAAGCTGTTCCGAGAACTTGTGTACTGCATTGATATCTTGCAAACTTCAGTCTACCAACATATGCTGAAAGAAGAAGAGCAGGTTTTTCCTCTTCTGATCCAAAAATTGTCTACTAAAGAACAAGCCTCACTTGTGTGGCAATTCATATGTAGTGTTCCTATAATGTTGCTGGAGGAAGTTTTGCCATGGATGGTGTCCTTCCTGTCAGCAGATAAACAAGCAGAAGTTACTCGGTGTTTTAATGAAATTGCACCAATGGAAACAGCACTGCAAGAGGTTTTGGTTTCTTGGCTTGGAAGCAACAAACAAACCTTCACTGGGACATATTTTCAGAGCGAGGAACTTCAAGGTTGCCGTGGATTCTTACATATAGAAAAATCATTTGGTCCGAGTTCATTCCATAGGAACTCCAAAGAAATTTCGAGTCGAACGAAAGTGAACAACAAAGAAACAGAAGATGAAGTCAACCAGGTTAAGGTTCTCCATCTTTGGCATAACGCTATTAAGAAAGATTTGAAAGAAATTCTGCAAGACCTTTATCTAATAAGAAATTCCGGTTCCGGCTGTTCTCAAAATTTAGACTCAATACTTATCCAGCTAAAATTCTTGGCTGATGTCCTCATCTTCTACAGCAATGCTCTTAAGAAATTCTTTCATCCTGTACTGAACAAACATGCGCATGACCGATTTTCCAAGTCTACTGAATATTTCCTTGGTGAAAGTCACATTGAAGATTTACAGCAGTTGTTATTATATAACTCAGAAAGTGAAATGCCTTTGACCAAACTTGTAGAGAAGCTTTGTGGAAAACTTGAATTATTTGTATCAGCAGTCAACAAACATTTTTCTTTTCAAGAAATTGAGGTGTTTCCTATCTTTAGAAAGAACTGCAGAAATGGAATGCAAGCGAGACTTCTAAGCTTGAGCATGCATATGATGCCCCTTGGGTTACTAAAATGTGTTATAACTTGGTTCTCAGTTCACTTGTCTGAAAAAGAATCCAGGTCCATTCTCTATTACATGAAGGAGGGAAATAGTTCTGTCAGTAAAGCTTTTGCGCCATTGTTACATGAATGGTTCCGCATTGGCTATTCAGGTAAAACCTCAATTGAAAAGTTCCGACAGGACTTGCAGCATATGTTCAAAAGAAGACACTCTTTTTCATCTGAGAAAATGAAGGAAGCTTGTGGGTTTTCATTTTTAAATTCTGACAAGCAGCCACATAAAAGCTGTGGCAAGAATTGTTTGTCCTATTCCTCATCTTCTGGATCCAAAAATGTGAGCAAGTATGAGACACCATACTCCACAGGAATTAATTTGCACATATTTTTCCCTGACACTGCTATGAAGTTAAATCAGCATCCAAGACTTCATGCAGCAAATTCTTCTTCTGTTTCATTTCTTAATGATCCAAAACCAATTGACCTGATATTTTTCTTTCACAAGGCTATTAAGAAAGATTTAGATTACCTAGTTCTTGGCTCGGCTCAGTTAGAGGGGCATGATGATTTGGTTACTGATTTCCAAAAACGGTTCAATCTCATATATTTTCTTCATCAAATCCATAGTGATGCAGAGGAGGAAATAGTGTTTCCAGCTTTGGAGGCAATAGGCCAGCTCAAAAACATTAGCCATGCCTACACCTTTGATCACAAACATGAAGTTGAGCACTTTGGTAAAATGTCTCGCATTCTTGATAAGATTTCTGAATTACAGCTTTTAGTTTCTACTACTGATTCAAAGATAAGGGACAAGAGAGTGCTAAGGCGTCATCATTTAATCAGGAAGCTGCAAGAAAGGTGCAAATCAATGCATAAGTTACTTTCTGATCATATAAACCGCGAGGAAATAGAAATTTGGCCTATAATTAGAGAATTCTTCTCGAACCGGGAGCAAGGGAAGATCATAGGATGCATACTTGGAAGAATAAGTGCAGAAATATTACAAGATATGATACCTTGGCTAATGGCATCTTTAACACAGGAAGAACAACATGTTTTAATGTTCTTATGGTCCATGGCTACTAAGAATACAATGTTTGATGAATGGTTAGGTGAATGGTGGAATGGGTACAGTATAGCTAAGGCAGCAGATGGATCAAATGATGCCCCTCTACAGAATGTTGAGCCACTAGAAATTATATCCAAATATTTGTCAGAAGAGGTTCTTAATGCATTACAAGAAGAATCGTCGGCCAACGAAAGCATAGATTTTTTGCAGAAGGATCTTATTGGCAATAACTTTGAGTTGCCCGACAAAAATGTTGATGACAATGTTAAGGTTCATAATGGAGCACAAAGTTATAGTCAATGTTCAGAATGCACAAATCAATTTCATGATATTAAGAAAAATGGCTGCAATGAAGTAAAACCAGTGGGCACTATGACAAGTCAGTCTGTTCAACATTTTGATTTTGACAAGTCTGGGCATTATGACAGACTTCTGAAATTGAATCAAGATGATCTCGAGAAGGTAATAAGAAGGGTATCTCGTGACTCTTGCCTAGACCCTCAGGAAAAGTCGTACATAATACAGAGCCTACTGACGAGCCGTTGGATCATTAGTCAGAAGATCTCTTCTATGGAAGCCAATATCAAAAGCGATGGACAGGAATTCCCTGGGAAACATCCATCTTACAAGGATCCTCATGAAAAAATCTATGGTTGCAAACACTACAAGAGGAACTGTAAGCTTTTGGCTCCCTGTTGCAACCAGCTTCATGCTTGCATACATTGCCATGACGAGGCATCAGATCATTTAATTGACAGAAAATCAATTACAAAGATGATGTGTATGAAGTGCCTGTTGATTCAACCAATCAATGCCACATGCTCATCAGTTTCTTGCTGCAATTTATCCATGGCAAAATATTACTGCAGGATCTGCAAGATATTTGAAGATGAAAGGGAAATTTACCATTGTCCCTATTGCAACTTATGTCGAGTTGGAAAGGGTTTGGGTGTTGACTATTTTCATTGCATGAATTGCAATGCTTGTATGTCTCGTTCTCTTATGATACACACATGCAGAGAGAAATCTTTAGAGGAAAACTGTCCGATTTGTCATGAATATATCTTCACATCCTGCTCTCCAGTAAAAGCCCTTCCATGTGGTCATGCGATGCACTCAACATGTTTCAAGGAATATACTTGCTTTAGCTATACCTGCCCAATATGTAGTAAGTCACTTGGAGACATGCAGGTCCTTTTTAGGATGTTAGATGCACTACTGGCCGAGCAGAAAATGTCTGACGAGTTTTCGGGTCAAACTCAGGTTATATTATGTAATGACTGTGAAAAGAAAGGAGCAGCTCCCTTCCACTGGCTTTACCATAAATGCCCTTGTTGTGGTTCCTATAACACTAGAGTTATATGA 3813 0.3868 MGGGDPSLSDMEEEEEENDVMVNDSVDILSRFRIFDAPILLFVCFHKALRSELDHLRSFAEMASSLEHDPHSCREIIVKLQHRFQFLKLAFKYHCAAEDEIIFHALDMHVKNVVCTYSLEHNSTNVLFDSILHFLDELMSCSENISKLFRELVYCIDILQTSVYQHMLKEEEQVFPLLIQKLSTKEQASLVWQFICSVPIMLLEEVLPWMVSFLSADKQAEVTRCFNEIAPMETALQEVLVSWLGSNKQTFTGTYFQSEELQGCRGFLHIEKSFGPSSFHRNSKEISSRTKVNNKETEDEVNQVKVLHLWHNAIKKDLKEILQDLYLIRNSGSGCSQNLDSILIQLKFLADVLIFYSNALKKFFHPVLNKHAHDRFSKSTEYFLGESHIEDLQQLLLYNSESEMPLTKLVEKLCGKLELFVSAVNKHFSFQEIEVFPIFRKNCRNGMQARLLSLSMHMMPLGLLKCVITWFSVHLSEKESRSILYYMKEGNSSVSKAFAPLLHEWFRIGYSGKTSIEKFRQDLQHMFKRRHSFSSEKMKEACGFSFLNSDKQPHKSCGKNCLSYSSSSGSKNVSKYETPYSTGINLHIFFPDTAMKLNQHPRLHAANSSSVSFLNDPKPIDLIFFFHKAIKKDLDYLVLGSAQLEGHDDLVTDFQKRFNLIYFLHQIHSDAEEEIVFPALEAIGQLKNISHAYTFDHKHEVEHFGKMSRILDKISELQLLVSTTDSKIRDKRVLRRHHLIRKLQERCKSMHKLLSDHINREEIEIWPIIREFFSNREQGKIIGCILGRISAEILQDMIPWLMASLTQEEQHVLMFLWSMATKNTMFDEWLGEWWNGYSIAKAADGSNDAPLQNVEPLEIISKYLSEEVLNALQEESSANESIDFLQKDLIGNNFELPDKNVDDNVKVHNGAQSYSQCSECTNQFHDIKKNGCNEVKPVGTMTSQSVQHFDFDKSGHYDRLLKLNQDDLEKVIRRVSRDSCLDPQEKSYIIQSLLTSRWIISQKISSMEANIKSDGQEFPGKHPSYKDPHEKIYGCKHYKRNCKLLAPCCNQLHACIHCHDEASDHLIDRKSITKMMCMKCLLIQPINATCSSVSCCNLSMAKYYCRICKIFEDEREIYHCPYCNLCRVGKGLGVDYFHCMNCNACMSRSLMIHTCREKSLEENCPICHEYIFTSCSPVKALPCGHAMHSTCFKEYTCFSYTCPICSKSLGDMQVLFRMLDALLAEQKMSDEFSGQTQVILCNDCEKKGAAPFHWLYHKCPCCGSYNTRVI 1270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01315 1270 Pfam CHY zinc finger 1035 1110 IPR008913 GO:0008270
Mepo1g01315 1270 Pfam Zinc-ribbon 1211 1268 IPR039512 -
Mepo1g01315 1270 Gene3D - 1235 1270 - -
Mepo1g01315 1270 SUPERFAMILY RING/U-box 1153 1210 - -
Mepo1g01315 1270 ProSiteProfiles Zinc finger CTCHY-type profile. 1100 1163 IPR017921 -
Mepo1g01315 1270 ProSiteProfiles Zinc finger RING-type profile. 1164 1206 IPR001841 -
Mepo1g01315 1270 Pfam Hemerythrin HHE cation binding domain 46 178 IPR012312 -
Mepo1g01315 1270 SUPERFAMILY Zinc hairpin stack 1101 1155 IPR037275 -
Mepo1g01315 1270 SMART ring_2 1164 1205 IPR001841 -
Mepo1g01315 1270 CDD Hr-like 45 176 - -
Mepo1g01315 1270 CDD Hr-like 621 767 - -
Mepo1g01315 1270 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1157 1208 IPR013083 -
Mepo1g01315 1270 SUPERFAMILY CHY zinc finger-like 1026 1092 IPR037274 GO:0008270
Mepo1g01315 1270 ProSiteProfiles Zinc finger CHY-type profile. 1028 1097 IPR008913 GO:0008270
Mepo1g01315 1270 Gene3D nmb1532 protein domain like 300 454 - -
Mepo1g01315 1270 Gene3D nmb1532 protein domain like 615 788 - -
Mepo1g01315 1270 Gene3D nmb1532 protein domain like 37 196 - -
Mepo1g01315 1270 CDD RING-H2_Pirh2-like 1163 1206 - -
Mepo1g01315 1270 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 663 1270 - -
Mepo1g01315 1270 FunFam Zinc finger protein-related isoform 1 1159 1208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01315 Mepo-Chr1 12969924 12985643 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01315 37 862 C2H2 Transcription Factor Family AT3G18290 32.399 2.89e-127 422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01315 K16276 - gmx:100802706 1985.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g01315 1 12969924 12985643 Mepo1g01315 1 12969924 12985643 ECH