Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01302 ATGGCGGGTGGGAGAGTTTTTTCAAATGGTCCTGCAAATATTTCAAATATGAATATGAATATTTTGCTTCAGAATCAACAACAAACTCCTCGTGGAAACTCTTCTCAACAACCTCTTGATTCTCTTTTCCTTTCTTCTTCTGCTTCTTTCTTTGGTTCAAGATCTATGGTGAGTTTTGAAGATGTTCAAGGAAGGAAAAGGTGCAACAGGTCTTTCTTGGGTGGATTTGATCTTGACGAAAACGGAGAAGATGAGATGGATGAGTACTTTCATCAATCCGAGAAGAAACGGCGTCTCTCAGTGGATCAAGTTCAGTTTCTTGAGAAAAGCTTTGAGGAGGACAACAAGCTTGAACCAGAGAGGAAAACCAAGCTAGCTAAAGACCTTGGTTTGCAGCCACGGCAAGTTGCTATTTGGTTTCAAAACCGTCGTGCAAGATGGAAGACCAAACAGCTTGAGAAGGATTATGATTCTCTTAATGATAGTTATGAGTCTCTTAAGACAGATTATGACAACCTTCTCAAGGAGAAAGATAGGTTGCAATCTGAGGTGGCAAGCCTAACTGAAAAGGTACTTGCAAGAGAGAAACAAGAGGGAAAATTCAAACAAGGTGAAAGTGAAACAGAGGAATTCTTGCAGGAACCACCAATGAATAAGCCTTTGGTTGATTCAGTTTCTGAGGGTGAAGGATCCAAATTGTCAATTGTTGAGGCTTCTAATAATAATAACAAACTTGAAGACATTAGTTCAGCAAGGAGTGACATATTGGATTGTGACAGCCCACGTTACACTGATGGAGTGTTAGAGACAGGTGATTCTTCGTATGTATTTGAACATGAATATCAATCGGACCTATCACAAGATGAAGAAGACAATTTATTGCCTCCTTACATTTTTACAAAACTTGAAGATGTGAATTACTCCGACCCGCCACATAATTCATCAAGTTATGGATTTCAAGAGGAAGATCATCATCAAGCTCTTTGGCCTTGGTCTTATTAG 1002 0.3942 MAGGRVFSNGPANISNMNMNILLQNQQQTPRGNSSQQPLDSLFLSSSASFFGSRSMVSFEDVQGRKRCNRSFLGGFDLDENGEDEMDEYFHQSEKKRRLSVDQVQFLEKSFEEDNKLEPERKTKLAKDLGLQPRQVAIWFQNRRARWKTKQLEKDYDSLNDSYESLKTDYDNLLKEKDRLQSEVASLTEKVLAREKQEGKFKQGESETEEFLQEPPMNKPLVDSVSEGEGSKLSIVEASNNNNKLEDISSARSDILDCDSPRYTDGVLETGDSSYVFEHEYQSDLSQDEEDNLLPPYIFTKLEDVNYSDPPHNSSSYGFQEEDHHQALWPWSY 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01302 333 Pfam Homeobox associated leucine zipper 150 191 IPR003106 GO:0006355|GO:0043565
Mepo1g01302 333 ProSiteProfiles 'Homeobox' domain profile. 90 150 IPR001356 GO:0003677
Mepo1g01302 333 Gene3D - 145 194 - -
Mepo1g01302 333 PRINTS Lambda-repressor HTH signature 121 130 IPR000047 GO:0003677
Mepo1g01302 333 PRINTS Lambda-repressor HTH signature 130 146 IPR000047 GO:0003677
Mepo1g01302 333 SUPERFAMILY Homeodomain-like 84 152 IPR009057 -
Mepo1g01302 333 CDD homeodomain 95 151 IPR001356 GO:0003677
Mepo1g01302 333 Pfam Homeodomain 95 148 IPR001356 GO:0003677
Mepo1g01302 333 ProSitePatterns 'Homeobox' domain signature. 125 148 IPR017970 GO:0000981|GO:0006355
Mepo1g01302 333 Gene3D - 98 144 - -
Mepo1g01302 333 Coils Coil 149 197 - -
Mepo1g01302 333 MobiDBLite consensus disorder prediction 197 228 - -
Mepo1g01302 333 FunFam Homeobox-leucine zipper protein HAT5 88 152 - -
Mepo1g01302 333 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 69 231 IPR045224 GO:0003700
Mepo1g01302 333 SMART HOX_1 93 154 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01302 Mepo-Chr1 12827153 12829257 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01302 52 267 Homeobox Transcription Factor Family AT3G01470 45.662 4.90e-46 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mepo1g01302 Homeodomain 6.6e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01302 - - mtr:11437653 604.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g01302 1 12827153 12829257 Mepo1g01302 1 12827153 12829257 ECH