Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01288 ATGCTTGGCGTGGTTCACATATATGATCTTGATCAAACAGTGAAGATGAGTTGGATGAATTTGCTTGGGTGTACTGGCGGTAAAGTCGCTTATGGCACGCCAGAAACCTTCAATCCACAGTGTGCTGCACCAGGCATTGATCCAGTGATCAGGATGACAGAACCTGCATCTACCGGGGAGGAAAATTCGTCGCCGCATCTTCCTGAAATAACACTTGGAATTGACATTGGCAGATCACCATGCTGTGTTTCTGTGTGGAATGGTTCCGAAGTGGAGATTTGGAAAGAAAAAATAAATGAGATGATTAAGAGATATTTCGAAACTTTCGATCATGTCTTTACTGATGGAGCTAGTAGTAGTAACGTCTCACTCTCCCAAGCGCATGAGGATGCAGTTTCCAACCTGAAAGACTTGATTAGCAAACTTTTCAATGAAAGTGCCAATTTCCCATTTCTGATGCACACTTTGGACATTAAGGTTCGTCCTTTTGTTGCTGCATTTGTGAACAAAGTGTGCAAACCCACCACTGCAGTAGAACTCCTTGGAAACTTTCTGGTGAAATTAAAAGAAATGGCTGAAACTGAACTGAAACAACCTATAAGAAATGTAGTGTTTATTATTCCAGTTTCATTCAGTCGATTGCAGCAAACCCGGATACGTCTCGCTTGTGAGATGGCCGGTCTAAAAGTTATCAGACTGATGCCTCAACCAACAGCAGTGGCTTTGCTTTATGCACATCAACAACTGCATGCTTCTGCTTCTTCTCACGAGGATATGGACAATGAAAGCAAGAAAATTGCTCTGATTTTCAATATGGACGCGGGTTATTGTGATGTTGCTATTATTGCAACAGAAAAAGGAAAATGCCAAATAAAAGTGTTGGCAGGAAGTGCTATTGGTGGAGAAGATTTGCTTGGAAATATGATGTGTCATCTCTTTCTTGATTATGAAAATATATTCAAGAGAAATGTTCACGGGGACACAGAAATTACAACGATGGCTTCTCTTCGAAGTATAGTCCACGACGCGATTACTAAGCTTTCGTCTGAGGCAAGTGTCAAGGTTTATTTAACGTCAATCAATCGTAGGGATGTAACACAGGAGGAGTTTGAGGAAGTAAACAAAGAAGTGTTTGAAAAGTGTGAAAGGCTAATCATCCAATGCATACCAAGGGTAGAGAGTCTTGTTACTAAAATATGCAAAGGAAAGAAACCTTATAAGTTAGGTGTGAATCCTTTGGATGATGTACTTGGTGGTGCAACAGTGGCCGGAGCTGTTAATGACCCCTCTGGTGACTTGGAATTGCTTACTTCTCAAGTCACACATCTTGCCATCGGAATTCGAGCTGATGGAAACAAATTTGTACCTATTATTCCAAGGAACACACCAGTGCCAATCCTGAGTTCGGATATACTTTTGGCAACTATTCATGATAATCAAACTAAGGCATTGATCGTTGTCTATGAAGGTGAGGGACAGAAGGTTGAAGAAAACCATCTTTTAGGCTATTTCGAACTAACTGAAATACCTAAAGCACCAAAAGGTTTTCATGACATCATTGTTTCCATGGACATAGACGATAATAGCATGTTGACGGTTACTGCTATGGTTGAGGTACCTCCTATTTCATCAGAGTTTCGAAAGTTTGATGATGGAGAGATTGGTAATTGTGATGAGTCCGGAATTAGAAAACATGGCGATACAATGGATTTGGTTACTATGGATTTGGAAGAATAA 1737 0.4059 MLGVVHIYDLDQTVKMSWMNLLGCTGGKVAYGTPETFNPQCAAPGIDPVIRMTEPASTGEENSSPHLPEITLGIDIGRSPCCVSVWNGSEVEIWKEKINEMIKRYFETFDHVFTDGASSSNVSLSQAHEDAVSNLKDLISKLFNESANFPFLMHTLDIKVRPFVAAFVNKVCKPTTAVELLGNFLVKLKEMAETELKQPIRNVVFIIPVSFSRLQQTRIRLACEMAGLKVIRLMPQPTAVALLYAHQQLHASASSHEDMDNESKKIALIFNMDAGYCDVAIIATEKGKCQIKVLAGSAIGGEDLLGNMMCHLFLDYENIFKRNVHGDTEITTMASLRSIVHDAITKLSSEASVKVYLTSINRRDVTQEEFEEVNKEVFEKCERLIIQCIPRVESLVTKICKGKKPYKLGVNPLDDVLGGATVAGAVNDPSGDLELLTSQVTHLAIGIRADGNKFVPIIPRNTPVPILSSDILLATIHDNQTKALIVVYEGEGQKVEENHLLGYFELTEIPKAPKGFHDIIVSMDIDDNSMLTVTAMVEVPPISSEFRKFDDGEIGNCDESGIRKHGDTMDLVTMDLEE 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01288 578 CDD HSP70_NBD 72 425 - -
Mepo1g01288 578 PANTHER HEAT SHOCK PROTEIN 70KDA 73 535 IPR013126 GO:0005524|GO:0140662
Mepo1g01288 578 Gene3D Actin; Chain A, domain 4 301 380 - -
Mepo1g01288 578 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 427 547 IPR029047 -
Mepo1g01288 578 PRINTS 70kDa heat shock protein signature 410 430 - -
Mepo1g01288 578 PRINTS 70kDa heat shock protein signature 70 83 - -
Mepo1g01288 578 PRINTS 70kDa heat shock protein signature 434 453 - -
Mepo1g01288 578 PRINTS 70kDa heat shock protein signature 516 532 - -
Mepo1g01288 578 Gene3D - 133 183 - -
Mepo1g01288 578 FunFam Heat shock 70 kDa protein 8 429 545 - -
Mepo1g01288 578 Gene3D - 260 389 - -
Mepo1g01288 578 SUPERFAMILY Actin-like ATPase domain 70 246 IPR043129 -
Mepo1g01288 578 SUPERFAMILY Actin-like ATPase domain 264 424 IPR043129 -
Mepo1g01288 578 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 437 539 IPR029047 -
Mepo1g01288 578 Gene3D - 72 248 - -
Mepo1g01288 578 Pfam Hsp70 protein 389 540 IPR013126 GO:0005524|GO:0140662
Mepo1g01288 578 Pfam Hsp70 protein 72 387 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01288 Mepo-Chr1 12690082 12693034 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01288 72 535 Calmodulin-binding Proteins AT3G12580 29.880 7.20e-56 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01288 K09489 - gmx:100809773 473.781