Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01284 ATGGAGGGCAGTCCTGGGAGATCTGGTGATGGAGATAGTGGACTCAAGGAAGATAAGAGAAGTGAGCATAGTACTGGTGATGATCATGAAAGTCATCATCATAAAAAGGAGACTATTGTTGAGGAAGCACCCATTGCTAATACAGAAAGATCAATTGAGGCTGGTCCAAGCACAATATCCTCGCCCAAAAATGATAAGGTTGATGAACAGCTTGAGACAACAAAAGCTCAAATGGGTGAGGTGAGAGAAGAAAATCAACGGTTAAAGATGTGCTTGAACAAAATAATGACAGAATACCGAGCATTGGAAATGCAATTTAACAATATGGTTAAGCAAGAAACAAAAAAGAACAATGTTGATCATAATGATAATAACCATGAAGAAATGAATGCAGAATCAGATTTTGTTTCTCTCAGTCTTGGAAGAGTTCCTAGTAACAATATTCCAAAAAATGATCAAGAGAAAGTTAACAAAGTGTCTAAACTAGCATTGAATAATGATGAAGAATTCAATAAGGAAGAGTTGTCACTTGGATTGGAATGTAAATTTGAAACATCAAAATCAGGTAGCACAACTGAAGGGTTACCAAATATTCCAAGTCCTGTGAATAGTTCTGAAGTTGTTCCAATAAAGGATGATGAAGTTGTGGAGACTTGGCCACCAAGTAAGACACTCAATAAGACAATGAGAGATGCAGAAGATGAAGTTGCTCAACAAACTCCTGCAAAGAAAGCTAGAGTTTGTGTTAGAGCAAGATGTGACACCCCAACGATGAATGATGGATGCCAATGGAGGAAGTATGGACAAAAAATTGCAAAGGGAAATCCTTGCCCTCGAGCTTACTATCGTTGCACCGTTGCACCATCATGTCCAGTTAGAAAACAGGTACAAAGATGTGTTGAGGACATGTCTATTCTAATCACAACATACGAAGGGACACACAACCACAGCCTTCCACTTTCAGCAACAGCCATGGCTTCCACAACTTCCGCGGCCGCATCGATGCTATTATCAGGTTCATCAACCTCCAACTCTGGTTCAATCCCATCATCACAAACCAACAATAATCTTCATGGCCTAAACTTTTATCTACCAGATGGTTCAAAATCAAATCAATTATACCTATCCAACCCTGCACTATCATCTCAACATTCACATCCAACTATCACTCTTGACCTCACTTCAAACCCATCAAATTCTTCAACATCATCACCCTTTGTTAGATTCAACTCAAGCTACAATAACAACAATAACCAATTACCAAGATACCCTTCTTCCACTCTTAGCTTTAGTTCTCCTGAATCAAATCCCATGCATTGGAATAGCTTCCTCAATTATGCTACTACTCAAAATCAACCATATAGTAATAATAGGAACAATAATAATCTAAGCACTTTAAACTTTGGTAGACAAAATACAATGGAAAGTATATACCAAACCTACATGCAAAAAAACAACAATAGTTCAAACATTTCACAACATGTAGGTTTACAAGATAGTACTATATCTGCAGCAACAAAAGCTATCACAGCAGATCCAACTTTTCAATCAGCTTTGGCTGCAGCACTATCTTCGCTCATCGGAAACACTAATCAAGGGAATCAAAATCAAAGTGCAGGAGAAAATTTGAGTCAGAAAATGAAATGGGCTGAAATGTTTCAGGTTTCTTCTACTTCATTGCCTTCATCAAGTTCTAAAGTAAATGGTTGTGCTTCAAGTTTCTTGAACAAAACGGCACCGGTGAACAATACACAGAATGGAAGTTTGATGTTGTTATCTCCTTCTTTGCCATTTTCTGCACCTAAAAGTGCTTCTACATCTCCTGGTGGTGATAATAGTGACAATACCAAGTAA 1854 0.3797 MEGSPGRSGDGDSGLKEDKRSEHSTGDDHESHHHKKETIVEEAPIANTERSIEAGPSTISSPKNDKVDEQLETTKAQMGEVREENQRLKMCLNKIMTEYRALEMQFNNMVKQETKKNNVDHNDNNHEEMNAESDFVSLSLGRVPSNNIPKNDQEKVNKVSKLALNNDEEFNKEELSLGLECKFETSKSGSTTEGLPNIPSPVNSSEVVPIKDDEVVETWPPSKTLNKTMRDAEDEVAQQTPAKKARVCVRARCDTPTMNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPSCPVRKQVQRCVEDMSILITTYEGTHNHSLPLSATAMASTTSAAASMLLSGSSTSNSGSIPSSQTNNNLHGLNFYLPDGSKSNQLYLSNPALSSQHSHPTITLDLTSNPSNSSTSSPFVRFNSSYNNNNNQLPRYPSSTLSFSSPESNPMHWNSFLNYATTQNQPYSNNRNNNNLSTLNFGRQNTMESIYQTYMQKNNNSSNISQHVGLQDSTISAATKAITADPTFQSALAAALSSLIGNTNQGNQNQSAGENLSQKMKWAEMFQVSSTSLPSSSSKVNGCASSFLNKTAPVNNTQNGSLMLLSPSLPFSAPKSASTSPGGDNSDNTK 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01284 617 MobiDBLite consensus disorder prediction 586 617 - -
Mepo1g01284 617 MobiDBLite consensus disorder prediction 379 404 - -
Mepo1g01284 617 MobiDBLite consensus disorder prediction 11 43 - -
Mepo1g01284 617 Pfam WRKY DNA -binding domain 259 316 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo1g01284 617 SUPERFAMILY WRKY DNA-binding domain 251 319 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo1g01284 617 ProSiteProfiles WRKY domain profile. 253 319 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo1g01284 617 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 39 539 IPR044810 GO:0003700
Mepo1g01284 617 Gene3D WRKY domain 242 320 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo1g01284 617 FunFam probable WRKY transcription factor 31 243 320 - -
Mepo1g01284 617 MobiDBLite consensus disorder prediction 1 67 - -
Mepo1g01284 617 Coils Coil 64 84 - -
Mepo1g01284 617 SMART WRKY_cls 258 318 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01284 Mepo-Chr1 12656718 12661263 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01284 78 528 WRKY Transcription Factor Family AT5G15130 42.797 4.32e-86 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mepo1g01284 WRKY 1.7e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01284 - - pvu:PHAVU_003G192000g 598.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g00120 3 1609735 1613458 Mepo1g01284 1 12656718 12661263 ECH
Mepo1g01284 1 12656718 12661263 Mepo1g01284 1 12656718 12661263 ECH