Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01278 ATGGGAAATTGCTTTGGAAGTCGTTACAAGGTTCATGAACCTTTCAGCTCCCAACCCAATTCTGAGGTTATAAAAGTTCCTTTTAGAAGCACTCAATTGTTAGTTCACTCAAGTGCAATAGTACATGGACACAATGATGGAGGTAAACCTGAGATTCTCCCAACTCCAAGATCTGAAGGGGACATACTTTCTTCTCCACATTTAAAAGCCTTCACATTTAAGGATCTTAGGAATGCCACTAAAAATTTCAGTAATGATAGTTTAATTGGACAAGGAGGGTTTGGTTATGTTTATAAAGGGTGGATTGATGCTCAATCACTTAAGGCTGCAAGGCCTGGATGTGGAACTGTTATAGCTGTCAAGAAGCTTAAGCCTGAAGGTTTTCAAGGCCATAAGGAGTGGCTGTCTGAACTCAATTATCTTGGCCAACTTCATCATCCAAATCTTGTCAAACTTACTGGATACTGCTTGGATGGGGATAACAGGCTTCTAGTCTACGAGTACATGCCGAATGGAAGCTTGGAAAAACATCTATTTAGTAGAAAGGGCACACAACTACTTCCTTGGGCAACAAGAATCAAAGTTGCTATTGGGGCTGCTCGAGGTCTCACCTTCCTTCATGACTCTAATCAACAAATTATCTACCGTGATTTCAAGGCGTCTAATATTTTATTAGACTCGGAATTTAATGCAAAACTGTCAGACTTTGGATTGGCCAAAGCAGGGCCCACTGGTGATCGTTCTCATGTTTCTACTCAAGTCCTAGGCACTCAAGGCTATGCTGCTCCTGAATATATTGCCACAGGTCGGCTGACAACAAGGTGCGATGTCTATAGCTTTGGAGTTGTGCTATTGGAACTACTATCAGGGCGCAATGCGGTCGATAAAACAAAATCAGGAGTGGAACATAATCTGGTAGATTGGGCAAGACCATACTTGGGTGATAGAAGAAAATTGTTTCGGATTATGGACACAAGATTACAAGGACAGTATCCACAAAGGGCGGCTTATACAGCTGCAATTCTTGCATTACAATGTATTAGTGAGGCCAAATTTAGACCACAAATGTCTGAGGTTTTGACGACTTTGGAACAATTGCCAGTCATCAGACATTCAGCTAGTCCTTCTAGATTCGAGGAGAAACCGTTCCCAGGTCCAATAAGAGAAAGAATCTGA 1176 0.4175 MGNCFGSRYKVHEPFSSQPNSEVIKVPFRSTQLLVHSSAIVHGHNDGGKPEILPTPRSEGDILSSPHLKAFTFKDLRNATKNFSNDSLIGQGGFGYVYKGWIDAQSLKAARPGCGTVIAVKKLKPEGFQGHKEWLSELNYLGQLHHPNLVKLTGYCLDGDNRLLVYEYMPNGSLEKHLFSRKGTQLLPWATRIKVAIGAARGLTFLHDSNQQIIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRSHVSTQVLGTQGYAAPEYIATGRLTTRCDVYSFGVVLLELLSGRNAVDKTKSGVEHNLVDWARPYLGDRRKLFRIMDTRLQGQYPQRAAYTAAILALQCISEAKFRPQMSEVLTTLEQLPVIRHSASPSRFEEKPFPGPIRERI 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01278 391 Gene3D Phosphorylase Kinase; domain 1 55 168 - -
Mepo1g01278 391 PANTHER OS01G0588500 PROTEIN-RELATED 52 366 - -
Mepo1g01278 391 ProSitePatterns Serine/Threonine protein kinases active-site signature. 213 225 IPR008271 GO:0004672|GO:0006468
Mepo1g01278 391 ProSiteProfiles Protein kinase domain profile. 83 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g01278 391 Pfam Protein tyrosine and serine/threonine kinase 87 359 IPR001245 GO:0004672|GO:0006468
Mepo1g01278 391 CDD STKc_IRAK 89 366 - -
Mepo1g01278 391 ProSitePatterns Protein kinases ATP-binding region signature. 89 122 IPR017441 GO:0005524
Mepo1g01278 391 FunFam Serine/threonine-protein kinase PBS1 169 380 - -
Mepo1g01278 391 SUPERFAMILY Protein kinase-like (PK-like) 61 364 IPR011009 -
Mepo1g01278 391 FunFam Serine/threonine-protein kinase BIK1 53 168 - -
Mepo1g01278 391 Gene3D Transferase(Phosphotransferase) domain 1 169 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01278 Mepo-Chr1 12532165 12535664 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01278 3 363 Glycoside Hydrolase AT3G07070 46.361 8.95e-105 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mepo1g01278 PK_Tyr_Ser-Thr 4.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01278 - - gmx:100791844 595.119