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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Mepo1g01276
ATGGTTCACGTTGCCTTTTACCGAAACTATGGCAAAACCTTCAAGAAGCCCCGTCGTCCATACGAGAAGGAGCGTTTGGATGCCGAGTTGAAGCTCGTCGGAGAGTATGGTCTTCGCTGCAAGAGAGAGCTGTGGAGGGTTCAATACGCTCTTAGCCGTATCCGTAACAATGCTAGAACCCTTTTGACCCTGGATGAGAAGAATCCTCGTCGGATCTTTGAGGGTGAAGCTCTTTTGAGGAGAATGTTCAAGCATGGTCTGCTTGATGAAACACAGAACAAGCTCGATTATGTTTTGGCTCTCACTGTTGAGAATTTTCTCGAGCGTCGTCTTCAGACTCTTGTGTTCAAATCTGGAATGGCTAAGTCTATCCATCACGCTAGGGTTCTTATCAGGCAGAGACACATCAGGGTTGGGAGGCAGGTGGTGAACATCCCATCCTTCATGGTGAGGGTTGATTCACAGAAGCACATTGACTTTTCCCTCACAAGTCCCTTTGGTGGTGGTCTTCCTGGTCGCGTGAAGCGAAAGAACCTTAAGGCTGCAGCCAAGAAGGCTTCTGGTGGTGATGGTGATGAGGAGGATGAAGATTAA
594
0.4848
MVHVAFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARTLLTLDEKNPRRIFEGEALLRRMFKHGLLDETQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGLPGRVKRKNLKAAAKKASGGDGDEEDED
197
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Mepo1g01276
197
PANTHER
30S 40S RIBOSOMAL PROTEIN
10
183
IPR022801
GO:0003735|GO:0015935|GO:0019843
Mepo1g01276
197
NCBIfam
30S ribosomal protein S4
11
166
IPR005710
GO:0003735|GO:0006412|GO:0015935
Mepo1g01276
197
ProSiteProfiles
S4 RNA-binding domain profile.
109
183
-
-
Mepo1g01276
197
SMART
s4_6
109
180
IPR002942
GO:0003723
Mepo1g01276
197
CDD
S4
109
153
-
-
Mepo1g01276
197
SMART
Ribosomal_S4_2
8
108
IPR001912
GO:0019843
Mepo1g01276
197
Pfam
Ribosomal protein S4/S9 N-terminal domain
8
108
IPR001912
GO:0019843
Mepo1g01276
197
FunFam
40S ribosomal protein S9
108
189
-
-
Mepo1g01276
197
Gene3D
-
108
164
IPR036986
GO:0003723
Mepo1g01276
197
SUPERFAMILY
Alpha-L RNA-binding motif
12
159
-
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Mepo1g01276
Mepo-Chr1
12517247
12519430
Dispersed
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Mepo1g01276
1
187
Cytoplasmic Ribosomal Protein Gene Family
AT5G39850
90.909
3.73e-125
349
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Mepo1g01276
K02997
-
gmx:100305663
343.199
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Mepo1g01276
1
12517247
12519430
Mepo1g01276
1
12517247
12519430
ECH
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