Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01271 ATGGATGGAGGAGATGATCTCCACCACCATCACCACCACCAGCATCATCAACACCACCACCAACACCAACAACAGCAACGACAAAATTTCCCATTCCAACTTCTTGAGAAGAAAGAAGATAACCAAGAAGCAGCATCATGTTCAACTTCTTCTCCATATCCATCCCTAGCAATCTCACCAACAGAACCAAGTACATCAAATTCAAACCGATCCAACCAACTTGTCCCAGCAGCAACACCAACAACCTCTGACCCTGCCAACAAAAAACCTCCTCCAAAAAGAACCTCCACCAAAGACCGTCATACCAAAGTAGAAGGCCGTGGCCGCCGCATCCGAATGCCGGCACTTTGTGCTGCTAGAGTTTTCCAACTTACACGCGAACTTGGTCATAAATCTGATGGTGAAACCATTGAATGGCTTCTTCAACAAGCTGAACCAGCTGTTATAGCCGCCACTGGAACTGGAACTATACCTGCTAACTTCACATCTCTCAATATCTCACTCCGTAGCTCAGGCTCATCCATGTCTGTTCCATCTCAGCTAAGATCTTCTTACTTCAACCCGAATTTCTCACTTCAACAACGAAGAACTCTTTTTCCTGGAATTGGTTTATCTCCTTCAGATAACAACAGCAACAACAACACTTCAATGCTTTTGAATTTCCAATCAAATAACCTAACAAATATGTTGCAGGCTAAACAAGAGGTTCGAGATGGAAACACAAACTCAAACGCGCCTTCTTCATCAACTACTTTAGATTTATCTGAAACAAGTGGAGAAGAATCCATGGGAGGAAGAAAAAGAAGAACTAGCAGTGGTGGCAGTGAGCAAGATTTATCATCATTACAACATCAAATGGGGAGTTATCTGATGCAATCAAGTGCAGGTTCAATTCCAGCAAGTCATACTCAGATTCCAGCAAATATATGGATGGTGGCGAATTCTAATAACCAAATAATGAGTGGTGGTGATCCTATATGGACTTTTCCGTCGGTGAATAATAGTGCTGCTGCTTTGTATAGAGGAGCAGTTTCAACAAGTGGTTTGCATTTTATGAATTTTCCACAACCTATGGCTTTGTTACCAGGTCAACAATTAGGTAATTCTTCTGGTGGTGGTGGTGGTGGTGGAGGAGGAGGAGGAGGTGGAAATATCAATATGAATATGAATATGAATGAAGGACATTTGAGTATGCTTGCTGGTCTTAGTCCTTATCGTCCGGTTTCCGATCATCATCAACAACAACAACACCATCAACCAAGTGGATCACAATCACATCATCATCGCAGTGATAGCCATGAACACGATGATCGACATGATAATTAA 1326 0.4246 MDGGDDLHHHHHHQHHQHHHQHQQQQRQNFPFQLLEKKEDNQEAASCSTSSPYPSLAISPTEPSTSNSNRSNQLVPAATPTTSDPANKKPPPKRTSTKDRHTKVEGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTSLNISLRSSGSSMSVPSQLRSSYFNPNFSLQQRRTLFPGIGLSPSDNNSNNNTSMLLNFQSNNLTNMLQAKQEVRDGNTNSNAPSSSTTLDLSETSGEESMGGRKRRTSSGGSEQDLSSLQHQMGSYLMQSSAGSIPASHTQIPANIWMVANSNNQIMSGGDPIWTFPSVNNSAAALYRGAVSTSGLHFMNFPQPMALLPGQQLGNSSGGGGGGGGGGGGGNINMNMNMNEGHLSMLAGLSPYRPVSDHHQQQQHHQPSGSQSHHHRSDSHEHDDRHDN 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01271 441 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 14 423 IPR005333 GO:0003700
Mepo1g01271 441 MobiDBLite consensus disorder prediction 362 389 - -
Mepo1g01271 441 Pfam TCP family transcription factor 95 265 IPR017887 -
Mepo1g01271 441 MobiDBLite consensus disorder prediction 424 441 - -
Mepo1g01271 441 ProSiteProfiles TCP domain profile. 97 151 IPR017887 -
Mepo1g01271 441 MobiDBLite consensus disorder prediction 1 108 - -
Mepo1g01271 441 MobiDBLite consensus disorder prediction 401 441 - -
Mepo1g01271 441 MobiDBLite consensus disorder prediction 236 258 - -
Mepo1g01271 441 MobiDBLite consensus disorder prediction 44 90 - -
Mepo1g01271 441 MobiDBLite consensus disorder prediction 91 108 - -
Mepo1g01271 441 MobiDBLite consensus disorder prediction 236 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01271 Mepo-Chr1 12466413 12468136 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01271 86 415 TCP Transcription Factor Family AT3G47620 46.939 1.14e-61 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Mepo1g01271 TCP 1.4e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01271 - - psat:127073804 631.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g01271 1 12466413 12468136 Mepo1g01271 1 12466413 12468136 ECH
Mepo5g01842 5 20076839 20078661 Mepo1g01271 1 12466413 12468136 PCT