Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01264 ATGAAAAAACGGCAAGTGGTGGTGGTGGTGAAACGCAACAGTACTTCATCTTCAAGAAATATTGTTGGATATGGAGAGTGTCAAAAGAATCATGCAGCTTATAGTGGAGGCTATGCTGTTGATGGATGTATGGAATTCATGGCATGTTCAGGGGAAGAAGCACTTACATGTGCTGCTTGTGGTTGTCATAGGAACTTCCACAAAAGAAAAGTACAGACTGAGGTAGTCAGTACCTAA 237 0.4177 MKKRQVVVVVKRNSTSSSRNIVGYGECQKNHAAYSGGYAVDGCMEFMACSGEEALTCAACGCHRNFHKRKVQTEVVST 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01264 78 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 13 72 - -
Mepo1g01264 78 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 24 70 IPR006456 -
Mepo1g01264 78 Pfam ZF-HD protein dimerisation region 22 71 IPR006456 -
Mepo1g01264 78 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 24 70 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01264 Mepo-Chr1 12374963 12375568 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01264 1 76 Zinc finger-homeobox gene family AT1G18835 65.385 1.03e-29 99.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Mepo1g01264 ZF-HD_dimer 1.2e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01264 - - ath:AT1G18835 106.686