Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01261 ATGAAGTGTAATTCCCCTCATCAGTACCCTTTATACATTGAACCAATGCCAAGCCTGGAAGACGACTATGGAATTTCTTATGATGTGGAGAAAGGATTTGGTGACTGGAGAGAAATTATCAGCGATGCAGCGTTTGATTCTGACAAATTGTATTTATGTTACACTAGTGAAAATAGTGGAAATGAAATTAAGAAAGAGGTCGTGGAGGTTAAGCCAGAAAGAGTAGAGAGGATTAGTGATGGTAATACAAAGAATTTGTCAAGGAAGACCATATCTCAGTATTTTTATATGCCAATAACACAAGCTGCAAGAGAACTCAATGTGGGCCTCACACATTTGAAAAAACGGTGTAGGGAATTGGGTATTCGTAGGTGGCCCCACAGGAAACTCATGAGCTTGCAAACTTTGATCAATAATATTGAGGAGCTGGGGAAAGAGGATGGTCTACTTAGTGAAGAAAAGTTGATGGATATCGAGAAATTGGAAGAAGAAATGAAGCTGGTGGAGGAGATGCCAGATATACAATTGCAAGATCATACCAAAAGGCTTAGACAACATTGTTTTAAGGCCAATTACAAGAAAAGAAAAATTATGGGTCAGCTGATGTTTTAA 612 0.384 MKCNSPHQYPLYIEPMPSLEDDYGISYDVEKGFGDWREIISDAAFDSDKLYLCYTSENSGNEIKKEVVEVKPERVERISDGNTKNLSRKTISQYFYMPITQAARELNVGLTHLKKRCRELGIRRWPHRKLMSLQTLINNIEELGKEDGLLSEEKLMDIEKLEEEMKLVEEMPDIQLQDHTKRLRQHCFKANYKKRKIMGQLMF 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01261 203 PANTHER PROTEIN RKD4 77 198 IPR044607 GO:0003700
Mepo1g01261 203 Pfam RWP-RK domain 85 133 IPR003035 -
Mepo1g01261 203 Coils Coil 151 171 - -
Mepo1g01261 203 ProSiteProfiles RWP-RK domain profile. 65 153 IPR003035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01261 Mepo-Chr1 12353515 12354595 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01261 83 199 AtRKD Transcription Factor Family AT1G18790 65.254 1.40e-49 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Mepo1g01261 RWP-RK 1.1e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01261 - - mtr:25480439 351.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g01261 1 12353515 12354595 Mepo1g01261 1 12353515 12354595 ECH