Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01253 ATGGAAAACGTTTCAGTCTTATCAAATAAGGAAGATGAGAAGATGGATTTGCCTCCTGGATTTCGATTTCACCCAACTGATGAAGAGCTTATAAGTCATTACCTTTACAAAAAGGTTATTGATTCAAATTTCTCTGCAAGAGCCATTGGTGATGTAGACCTCAACAAGTCTGAACCTTGGGATTTACCATTTAAAGCAAAAATGGGAGAAAAAGAATGGTACTTTTTCTGTGTGAGAGACAGAAAATATCCAACAGGTTTGAGGACAAACAGAGCAACAGAAGCAGGGTATTGGAAAGCAACTGGGAAAGATAAAGAAATTTTCAAAGGGAAATCGTTGGTTGGTATGAAGAAAACTCTTGTTTTCTACAAAGGAAGAGCACCTAAAGGAGAAAAAAGTAATTGGGTTATGCATGAATATCGACTTGAGGGTAAATTCTCTGTTCATAATCTTCCAAAAGCTGCAAAGAATGAATGGGTGATTTGTAGGGTATTTCAGAAGAGTTCAGCTGGGAAAAAAACACATATTTCTGGTATAATGAGGTTGGATTCACTTGGTAATGAATTTAGTTGTTCTGTTTTACCACCACTTACTGATTCGTCGAATTCGATTGGGAAAATCAAACAATTGAATGATTCAGCTTACGTGTCCTGCTTCTCCAACTCAATTGATGTTCAAAGAAACCAAGGAGGGATCTTTGATTCATTCAACAACTCAATTTATGGTGTTTCTTCACATAATCAACTAGATTTTTTCCCAAGAATTTCATCTTCTAATGGTTCATTATACTCTAATAATCAAGGTGCGGTTAATTTGCAATATCCTAGTTCTGTTTGTGGTATTCAAGATCAAGCAATTTTAAGAGCTTTGTATGAAAACAATGGTTTCAAGACTGAGAGACAGCAACAAATTATGAGTGTGTCACAGGAAACTGATTTAACTACTGATATGAATGCTGAAACATGTTCTGTTGTGTCAAATTTTGATATTGGTAGAAGGGCTTTTGAGAATAATCAGAATCGTCCACCACCTGCTTCTGTTGCAGCTGTTGATTTTGATGGTACTTTGTGGAATTACTGA 1080 0.3583 MENVSVLSNKEDEKMDLPPGFRFHPTDEELISHYLYKKVIDSNFSARAIGDVDLNKSEPWDLPFKAKMGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIFKGKSLVGMKKTLVFYKGRAPKGEKSNWVMHEYRLEGKFSVHNLPKAAKNEWVICRVFQKSSAGKKTHISGIMRLDSLGNEFSCSVLPPLTDSSNSIGKIKQLNDSAYVSCFSNSIDVQRNQGGIFDSFNNSIYGVSSHNQLDFFPRISSSNGSLYSNNQGAVNLQYPSSVCGIQDQAILRALYENNGFKTERQQQIMSVSQETDLTTDMNAETCSVVSNFDIGRRAFENNQNRPPPASVAAVDFDGTLWNY 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01253 359 Gene3D NAC domain 26 171 IPR036093 GO:0003677|GO:0006355
Mepo1g01253 359 Pfam No apical meristem (NAM) protein 18 142 IPR003441 GO:0003677|GO:0006355
Mepo1g01253 359 ProSiteProfiles NAC domain profile. 17 167 IPR003441 GO:0003677|GO:0006355
Mepo1g01253 359 FunFam NAC domain-containing protein 100-like 26 171 - -
Mepo1g01253 359 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 16 264 - -
Mepo1g01253 359 SUPERFAMILY NAC domain 12 167 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01253 Mepo-Chr1 12282801 12284867 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01253 15 359 NAC Transcription Factor Family AT5G07680 57.803 2.42e-129 371
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mepo1g01253 NAM 5e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01253 - - cam:101502392 631.328