Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01246 ATGGAAACTGGTGGACGAAACGAAACACCCTTCTTGGGTTTTCGTTTTGTCTCCAAATTTCTATTTTGCGCCATTTCTGGAACTCTCACTGCATGTTTTGCCTTTGCTGGGGCCATTACAGGAGCTATAGCTGGTGCTTTAGCAGCTAAGGCTACCAAAAGTGGTTTTCTCCGGGGAGTTTCATTGGGTGCCATTGCCGGGGCTATACTCTCGGTGGAGGTGTTGGAAGCTTCCCGTGCTTATTGGTGTATGGAACAAACTGGTTCACGCGGCGCGTCTTCTATGGCAGATTTCATAGAGGAACTTGTTCGTGGAAGGCTTGTAGAAGAATCACTTACACCTGCTATTTTAACTGCTTACAATTTGCAATTTGAGCAGGTTGGAGTTGCTAATAACATTGGCTATGATGAGATTCATGATGTTCATAGCTTTGTATCACCCAGGGGATTGTCAGGGGATTCATTGAATAAGCTACCACACCATATGGTTTTGAAGGGCATGAAGGCAGAGGATACTTTCTGTGCAATATGTCTGCAGGACATTGAAGTTGGAGAAGTTGCAAGAAGCTTACCTCGTTGTGACCATACTTTTCACTTGATATGCGTGGACAAATGGCTTGTCAAGAATGATTCCTGTCCCATTTGCAGACAGAATGTGTAG 660 0.447 METGGRNETPFLGFRFVSKFLFCAISGTLTACFAFAGAITGAIAGALAAKATKSGFLRGVSLGAIAGAILSVEVLEASRAYWCMEQTGSRGASSMADFIEELVRGRLVEESLTPAILTAYNLQFEQVGVANNIGYDEIHDVHSFVSPRGLSGDSLNKLPHHMVLKGMKAEDTFCAICLQDIEVGEVARSLPRCDHTFHLICVDKWLVKNDSCPICRQNV 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01246 219 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 32 - -
Mepo1g01246 219 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 136 219 IPR013083 -
Mepo1g01246 219 SUPERFAMILY RING/U-box 155 219 - -
Mepo1g01246 219 ProSiteProfiles Zinc finger RING-type profile. 174 216 IPR001841 -
Mepo1g01246 219 PANTHER NEP1-INTERACTING PROTEIN-LIKE 2 16 218 IPR044523 -
Mepo1g01246 219 SMART ring_2 174 215 IPR001841 -
Mepo1g01246 219 Pfam Ring finger domain 174 216 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01246 Mepo-Chr1 12212211 12215311 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01246 17 219 C3H Transcription Factor Family AT1G74410 55.882 2.77e-73 220
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01246 - - gmx:100800105 338.576
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g01246 1 12212211 12215311 Mepo1g01246 1 12212211 12215311 ECH