Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01244 ATGGATACTGAAGAACTTATTGATTTGAACAGTAAAGAGGTTAATTGTGGTGGAAATAATAGCAAGAGTGGTGATGGATTCATCGATAGGAGTAAAGTTAGGATTTTGCTGTGTGATAGTGATTCCAAGAGTTCAGAAGAGGTTTTTACACTTCTTATTAATTGCTCTTATCAGGTTACGTCTGTAAAATCCGCACGGCAAGTGATTGACGCATTGAATGCGGAAGGACAATATATAGATATCATACTAGCGGAAGTTGACCTTCCAATAAAAAAGGGAATGAAGATGTTGAAGTACATAGCACGGGATAAAGAACTGCGCCGAATCCCTATTATAATGATGTCTGCACAAGATGAGGTATCAATTGTTGTTAAGTGCTTGAGGCTCGGAGCAGCAGACTATCTAGTAAAGCCTTTACGTACTAATGAACTATTAAATTTGTGGACCCACATGTGGAGAAGGAGACGCATGCTTGGACTTATAGAGAACAACATCTTGAATTATGATTTTGATCTGGTAGCATCAGACCCTAGTGATGCCAATACAAACAGCGCCACCTTCTTCTCTGATGACACAGACGACAAGTCCAAAAGAAGCAATAATCCCGAGGCTGGAATTTCAATCCAACAAGAACAGGCGGAAATTTCAATCCAACAAGAAGAGGCTAGTATTGCCACTGCTGCTGCTGTTATTGAGGAGCATCCATATGTTCATGTATCAGAATATCAGCCTGATGTACCGGGAATTAGTGATCGAAGAAGAACAGGTTCTTCAGCACAGCATCCGCCGTGCAACAGAGTTACAAATAGTAGCTTTGATGGTCCGAAGAAGAGTGAACTCAGAATTGGAGAATCATCAGCCTTTTTCACTTATGTCAAAGCAACAACAATGAAGAGCAACTTGGAAGAGATTGCTCATTTTGACAATAGCGGTACATTACTAGTGAGGGTGGAAGATATGAATCAAGCATGTTCTCAACAAGGGGGTAATGACCTTATAAGACATGAAAATGGAGAAACGATTGAAAGCCATTCACAAGATGACTTACCTAGAAGCAATAGTATCCCCGATTCTTTCTCTGTTGAGAGATCGTGTACCCCACCTGCATCAATGGAGGTTTCACAGCAAAATAGTAATCACAGGGAAGAACATCCACAAGGGGTGGTTCATCCAAGAAATGGAAGTTATGGTTCTGAGCTCAACCAATCGGGCATGCCTGCCCAACATGCTTATCCGTATTATATGCCAGGAGTTGCTAATCATGTTATGATGCAGTCATCAACACATATGTATCAAAAGAATATCCAGAACCTTCAGAGTCATGTTAGTTCATCTATGATTTCCCAGTACAATCAACTTCCCCAATGTCCACCTCATGCAACTGGGATGACACCCTACCCATATTTTCCCATGAGTATTTGTTTACAAACCGGTCAGGTTTCTACAGCTCATCCATGGCCGTCATTAGGAAGTTCAACTTCATGTGAAGCAAACTTAAGAAAAGTTGATAGGAGAGAAGCAGCATTGATGAAGTTTAGACAGAAAAGAAAAGAGCGTTGCTTCGATAAGAAAATTAGGTACGTCAATCGGAAACAACTTGCAGAAAGGCGGCCTCGTGTTAGGGGACAGTTTGTCAGGAAGTTGAATGGTATTAATGTGGATCTAAATGGACAACCTGCTTCCACCGACTATGACGATGAGGATGAAGAGGAGGAAGAAAACAATGACACAAGAGATTCCTCTCCTAAGGATGCTTGA 1758 0.4118 MDTEELIDLNSKEVNCGGNNSKSGDGFIDRSKVRILLCDSDSKSSEEVFTLLINCSYQVTSVKSARQVIDALNAEGQYIDIILAEVDLPIKKGMKMLKYIARDKELRRIPIIMMSAQDEVSIVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLIENNILNYDFDLVASDPSDANTNSATFFSDDTDDKSKRSNNPEAGISIQQEQAEISIQQEEASIATAAAVIEEHPYVHVSEYQPDVPGISDRRRTGSSAQHPPCNRVTNSSFDGPKKSELRIGESSAFFTYVKATTMKSNLEEIAHFDNSGTLLVRVEDMNQACSQQGGNDLIRHENGETIESHSQDDLPRSNSIPDSFSVERSCTPPASMEVSQQNSNHREEHPQGVVHPRNGSYGSELNQSGMPAQHAYPYYMPGVANHVMMQSSTHMYQKNIQNLQSHVSSSMISQYNQLPQCPPHATGMTPYPYFPMSICLQTGQVSTAHPWPSLGSSTSCEANLRKVDRREAALMKFRQKRKERCFDKKIRYVNRKQLAERRPRVRGQFVRKLNGINVDLNGQPASTDYDDEDEEEEENNDTRDSSPKDA 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01244 585 ProSiteProfiles CCT domain profile. 505 547 IPR010402 GO:0005515
Mepo1g01244 585 MobiDBLite consensus disorder prediction 242 278 - -
Mepo1g01244 585 MobiDBLite consensus disorder prediction 341 400 - -
Mepo1g01244 585 SUPERFAMILY CheY-like 29 158 IPR011006 -
Mepo1g01244 585 Pfam CCT motif 505 547 IPR010402 GO:0005515
Mepo1g01244 585 ProSiteProfiles Response regulatory domain profile. 34 152 IPR001789 GO:0000160
Mepo1g01244 585 Pfam Response regulator receiver domain 35 146 IPR001789 GO:0000160
Mepo1g01244 585 SMART REC_2 33 148 IPR001789 GO:0000160
Mepo1g01244 585 MobiDBLite consensus disorder prediction 253 275 - -
Mepo1g01244 585 MobiDBLite consensus disorder prediction 552 585 - -
Mepo1g01244 585 MobiDBLite consensus disorder prediction 561 575 - -
Mepo1g01244 585 MobiDBLite consensus disorder prediction 183 202 - -
Mepo1g01244 585 PANTHER TWO-COMPONENT RESPONSE REGULATOR 33 333 IPR045279 GO:0009736
Mepo1g01244 585 MobiDBLite consensus disorder prediction 347 376 - -
Mepo1g01244 585 Gene3D - 33 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01244 Mepo-Chr1 12180994 12185836 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01244 22 584 Response Regulator Gene Family AT5G61380 49.843 0.0 523
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Mepo1g01244 Response_reg 2e-16 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01244 K12127 - gmx:100786522 888.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g01244 1 12180994 12185836 Mepo1g01244 1 12180994 12185836 ECH