Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01235 ATGGGTTGTGTGTTTGTGAAGCAAGGTGTGTCTGTGACACCTGCCGTTGACCATTCAGTTGACTTAGAGAGGAATAACAGTGTAAAGAAGAAGAATAAGAAGAATACTGAGTCATTTGGAGTGAGTTGGAGTGAGGTAGGTGACTCAGGAAGAACAAGTTTGAATGGTGAAGGTGGTTCATTGAGTTTCAGGTTAGGGAATCTTAGTAAGTATGTGGAGGGAGAACAAGCCGCGGCTGGTTGGCCAGTTTGGCTTAGCGCGGTTGCTTCCGAAGCTATTCATGGTTGGGTTCCTCTCCGGTCTGATGCATTTGAAAAACTTGACAAGATTGGGCAGGGTACATATAGCAGTGTTTTCCGAGCGAAGGAGATTGAGACGGGAAAGATAGTGGCATTAAAGAAGGTGAGATTTGACAATTTTGAGCCAGAAAGTGTGAGGTTTATGGCAAGAGAAATTATGATTCTTAGAAGGCTTGATCATCCAAATATCATTAAACTGGAAGGATTGATTACTTCAAGATTGTCTTGTAGCATCTACCTTGTATTTGAGTACATGGAGCATGATGTCACAGGGCTCTTGTCTAAACCAGAAATCAACTTTACCGAATCACAGATCAAATGCTACATGAAACAATTGTTATCTGGTCTTGAGCACTGTCATTCAAGGGGTGTAATGCACCGTGACATCAAAGGATCAAATCTTCTGGTGAATAATGAAGGGATATTAAAGGTCGCAGATTTTGGATTGGCAAATTTCTCTAATTCCGGGAAGAAGCAGCCACTCACTAGTCGCGTTGTCACCTTATGGTACCGTCCTCCAGAGCTTTTGCTCGGTTCAACAGATTATGGTCCATCTGTGGATCTTTGGAGTGTTGGTTGTGTATTTGCCGAGCTACTTGTTGGGAAGCCTATACTTAAGGGAAGAACAGAGGTTGAACAATTGCATAAAATCTTCAAGCTCTGCGGCTCTCCACCCGATGAATACTGGAAAAAGACCAGACTGCCTCACGCAACTTTATTCAAGCCACAGCAACCATATGATAGTTGCCTAAGAGAAACATTTAAAGATTTTCCTGCAACCAGTGTAATCCTGTTACAAAATCTTCTTTCGATTGAACCAAACAAACGTGGAACGGCATCATCTGCTCTTTCATTGGAGTATTTCAAAACAAAACCTTATGCATGCGAGCCATCAAGCTTACCAGTATACCCACCTAGCAAAGAGATCGATGCGAAACACGAGGAGGAGACAAAAAGGAAAAAGATTGCTGGGCGAGTTTGTGGACCTGAAAAAAGAAGAACATCAAGAAAGCCAGTAGGACTGAGTAAATTACCTCTAGCCGAGGATTTGACAAGTCAAGTTCAAACTTCACAAAACATGGATGATAGATCTGTCCACATCCTTAAAGAAGAGAACACAAACATTTGTGAAATGGCAACAAGGCCACCCACTGGTAAACCAGAAGATGCTTCCCATATAAAGGATGCATCTCAAGTAGATATTCCCTTTCACGGACCATTACAAGTTTCAAAATCAAGTGGATTTGCATGGGCAAAAAGGCGTAAAGATGACGCTACTTCAATTAGATCCCACACTCGATCTATTTCTAAAGGACATATATTTAGTTCATTAGAAACTTCTACACTAAATTCAAATAACATTTCTGATAATAGAAACAATGAAAATAAGGAAGTTTTGGGGGGACGCACCAGCTCCAGAGGTCATGATCTATTTGAAATTTCTAAGCTAGTGATGCAAAACCAATGGAGTAAGTTTGATCGTCCAGATTCCTTTGATACTTCTGAAGAGTACCACTCACAAGAACTGTCTATGATGCTTTATCATAGAGAAGATTCAATGTCCAAGAGAAGTAACCGGAGTTATCAGGATCAAGGAGAGAAGGTGGAATTTTCAGGGCCAATAATATCTCAAATGCATACAGTTGACGAGCTCTTAGAAAGACATGAGCGCCACATTCGACATACAGTCCGAAGATCATGGTTTCAGAGAGGTAAGAAGCATGGGAATTAA 2031 0.4121 MGCVFVKQGVSVTPAVDHSVDLERNNSVKKKNKKNTESFGVSWSEVGDSGRTSLNGEGGSLSFRLGNLSKYVEGEQAAAGWPVWLSAVASEAIHGWVPLRSDAFEKLDKIGQGTYSSVFRAKEIETGKIVALKKVRFDNFEPESVRFMAREIMILRRLDHPNIIKLEGLITSRLSCSIYLVFEYMEHDVTGLLSKPEINFTESQIKCYMKQLLSGLEHCHSRGVMHRDIKGSNLLVNNEGILKVADFGLANFSNSGKKQPLTSRVVTLWYRPPELLLGSTDYGPSVDLWSVGCVFAELLVGKPILKGRTEVEQLHKIFKLCGSPPDEYWKKTRLPHATLFKPQQPYDSCLRETFKDFPATSVILLQNLLSIEPNKRGTASSALSLEYFKTKPYACEPSSLPVYPPSKEIDAKHEEETKRKKIAGRVCGPEKRRTSRKPVGLSKLPLAEDLTSQVQTSQNMDDRSVHILKEENTNICEMATRPPTGKPEDASHIKDASQVDIPFHGPLQVSKSSGFAWAKRRKDDATSIRSHTRSISKGHIFSSLETSTLNSNNISDNRNNENKEVLGGRTSSRGHDLFEISKLVMQNQWSKFDRPDSFDTSEEYHSQELSMMLYHREDSMSKRSNRSYQDQGEKVEFSGPIISQMHTVDELLERHERHIRHTVRRSWFQRGKKHGN 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01235 676 ProSitePatterns Protein kinases ATP-binding region signature. 110 133 IPR017441 GO:0005524
Mepo1g01235 676 Gene3D Phosphorylase Kinase; domain 1 91 186 - -
Mepo1g01235 676 ProSitePatterns Serine/Threonine protein kinases active-site signature. 224 236 IPR008271 GO:0004672|GO:0006468
Mepo1g01235 676 FunFam probable serine/threonine-protein kinase At1g54610 91 186 - -
Mepo1g01235 676 MobiDBLite consensus disorder prediction 549 571 - -
Mepo1g01235 676 Gene3D Transferase(Phosphotransferase) domain 1 187 428 - -
Mepo1g01235 676 Pfam Protein kinase domain 104 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g01235 676 FunFam probable serine/threonine-protein kinase At1g54610 187 427 - -
Mepo1g01235 676 CDD STKc_CDK9_like 104 388 - -
Mepo1g01235 676 SMART serkin_6 104 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g01235 676 SUPERFAMILY Protein kinase-like (PK-like) 98 393 IPR011009 -
Mepo1g01235 676 ProSiteProfiles Protein kinase domain profile. 104 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g01235 676 MobiDBLite consensus disorder prediction 549 567 - -
Mepo1g01235 676 PANTHER CELL DIVISION PROTEIN KINASE 102 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01235 Mepo-Chr1 12091338 12096124 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01235 96 445 Core Cell Cycle Gene Families AT5G10270 48.913 2.61e-112 346
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Mepo1g01235 Pkinase 2.6e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01235 - - gmx:100816047 1125.54