Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01230 ATGTCAGAGTTGCAGGAAACACATTCCTGTTGCTTCCTATTTTTACTCTCAATTTCCTTCATCCTTCTTTCAGGTAGGTTTGTTGTTGGAGATTCTTTGGACACAGACAAACAAATTCTGTTGAAGTTGAAAAAGTACTTGGACAACAAAACTCTTGCAGACCAAGGAAAGTACATATATTGGGACACAAACAGTTCCAATTCAAATCCATGTGAATGGCAAGGAATTAGGTGTAACAAAGCAAAGAGAGTAATTGGCATAGATCTCTCTTACAGTGACATTACAGGAGAGATATTTCAAAGCTTCTCTCAGCTTACTGAGCTCACACATCTCGATCTCTCGCAGAACACGCTCTTTGGATATATTCCAAATGATTTGAGAAACTGTCACAAGCTATTGCATCTCAATCTCTCTCACAATATTCTTGATGGAGAATTGAATTTGACTGGATTGACATCCTTGCATACACTTGATTTGTCCTTGAATAGATTTCATGGAGAAATTGGGCTATGGAATTTGCCATCCATGTGTGAAAATTTAATCACTTTGAATATCTCAGGCAATAACTTAACTGGTGAGATTGGTAATAGTTTTGATCAATGTTCAAAGTTGAAGTACTTGGATTTGAGCACCAACAAGCTGAGTGGAGGTATATGGAATGGATTTGCAAGGCTTAGGCAGTTTTCTATTGCTGAGAATCATCTCAGTGGAAACATTTCATCTGAAGCTTTTCCATTGAATTGTGAACTTGTGGAATTGGATCTTTGTCAAAATGGGTTTGTTGGCAAAGCACCGAAGGAAATTGCTAACTGCAAGAATCTAACCATGTTGAATCTTTCAAGTAACAATTTTACTGGAGCTATCCCTATTGAAATGGGGTCCATTTCAAGGCTGAAAGGATTGTACTTGGGGGGAAACACCTTTTCAAGAGAAATTCCTGAGGCTCTTTTGAAATTGAATAATTTGGTGTTCTTGGATTTGAGCAGAAACAAATTTGGTGGTGACATACAAAAGATTTTTGGGAAATTTAAACAGGTGAGATTTCTTCTTTTGCACTCTAATTCATACACTGGAGGATTGTTATCATCTGGAATTTTCACATTGCCGAACATTACACGGTTAGACCTAAGCTTCAACAACTTTTCAGGTCCATTACCTGTTGAAATCTCTCATATGCAAAGTCTAAAACTTTTAATGTTATCATATAACCAATTCAATGGATCTATTCCATCAGAATTTGGAAATATGCATAATTTACAAGCACTTGACCTTGCTTTCAACAAGTTGAGTGGACCAATACCTCCAAGCATTGGAAACTTGAGTTCTCTCTTGTGGTTGATGCTTGCAAACAATTCATTAACTGGAACAATCCCTTCAGAGTTAGGGAACTGTACTAGTTTATTATGGTTAAACCTCGCCAACAATAACCTCTCTGGAAAGTTTCCTCGCGAACTTTCTAAAATCGGAAGGAATGCGATGACAACATTTGAAGCAAATAGGCGAGACGGTGGAGTGACTGCTGGATCTGGTGAATGTTTAGCAATGAAGAGATGGATACCTGCAGATTACCCTCCATTCAGCTTTGTGTATGATATTTTAACAAGGAAAAATTGTAGAGGACTTTGGAATAAATTGCTCAAAGGGTATGGAATTTTTCCATTTTGCACACCTGGGTCCTCCCTTAGGTTATCTTTAATATCAGGTTATGTTCAGTTAAGTGGAAACAAGCTAAGTGGTGAAATCCCTTCAGACATTGGAACAATGGTGAATTTCAGTATGTTGCATTTGGGATTCAACAGTTTCTCTGGGAAGTTTCCACCCGAGTTGGGAAGTATTCCACTTATGGTCTTGAACTTGACTAGAAACAACTTTTCAGGTGAAATTCCTCAGGAAATTGGAAACTTGAAATGCTTGCAAAATCTTGATTTGTCTCACAACAATTTCTCAGGAAATTTTCCTACAAGTTTGAACAAAGTGGCTGAGCTTAACAAGTTCAACATCTCCTATAATCCCTTCATATATGGCGAGGTTTCATCAAGTGGACAATTTGTTACTTTTGAGAAAGATTCATATTTAGGTGACCCTTTGTTGATCCTTCCCGACTTCATCGACAACACTACCAGAAACAACAAAAACACGACCTTTCACAGTGACCATAAAAAGCCGGCAAAACTATCCGCGTTCTTGGTTTTTCTGGCCATAACACTTGTTTTTATTATATTTGGCTTTCTAACAATAATAGTCTGTGCATTAGTCAAAACCCCATCAGATCAATATCTCTTGAAGGATCATACAAAACATTGCAATGACTCAAGTAGCTCAGGAATAGGGTCCTCCCAGTGGTTATCTGATTCGGTTAAAGTCATTCGTTTGAACAAAACAGCTTTCACCTATGCAGACATTTTGATAGCAACAAGCAGCTTCTCAGAAAACAGAATCATAGGAAAAGGTGGATTTGGAACAGTATACAAAGGAGTTTTCGCAGACGGTAGAGAAGTGGCAGTGAAGAAGCTTCTAAGCGAAGGACCTGAAGGCGAAAAGGAATTCCAAGCTGAAATGGAAGTTCTAAGTGGCCATGGTTTCGGTTGGCCTCATCCAAACCTCGTCACACTCCACGGTTGGTGTTTAAGCAATTCAGAAAAGATACTTGTTTATGAGTACATAGAAGGTGGAAGCTTAGAAGATCTAATAACCGATAGAACTCGTCTGACATGGAAGAAAAGGCTACAAGTTGCTATCGACGTGGCTCGCGCGCTTGTCTATTTACATCATGAATGTTATCCTTCTATTGTTCATAGAGATGTGAAGGCTAGTAATGTGATGTTAGACAAAGAAGGGAAAGCAAAAGTAACAGATTTTGGATTAGCTAGAGTTGTTAATGTTGGTGATAGTCATGTGAGTACAATGGTTGCTGGAACTGTTGGATATGTTGCACCTGAATATGGACAAACAATGAAAGCTAGTACAAAAGGAGATGTTTATAGTTATGGTGTGTTGGCTATGGAGTTGGCTACAGGTAGAAAAGCAGTAGATGGAGGTGAAGAGTGTTTGGTTGAATGGACAAGGCGTGTCATGGGAAGAAAACAACAAACAAAACATCAACAACATCATGTGTTGAGTCATTTGGGTTCAAGACTTGTTGGTGGGGCAGAGGAGATGGGTGAATTGCTATGTATTGGTTTGAAGTGTACAAATGAGGCACCAAATGCTAGGCCAAATATGAAACAAGTTTTGACTATGCTTATAATGATATCTAAATCTAATGTTGGAGATTCATCAAGTGATCATGGGCACAATGTTTAG 3303 0.3842 MSELQETHSCCFLFLLSISFILLSGRFVVGDSLDTDKQILLKLKKYLDNKTLADQGKYIYWDTNSSNSNPCEWQGIRCNKAKRVIGIDLSYSDITGEIFQSFSQLTELTHLDLSQNTLFGYIPNDLRNCHKLLHLNLSHNILDGELNLTGLTSLHTLDLSLNRFHGEIGLWNLPSMCENLITLNISGNNLTGEIGNSFDQCSKLKYLDLSTNKLSGGIWNGFARLRQFSIAENHLSGNISSEAFPLNCELVELDLCQNGFVGKAPKEIANCKNLTMLNLSSNNFTGAIPIEMGSISRLKGLYLGGNTFSREIPEALLKLNNLVFLDLSRNKFGGDIQKIFGKFKQVRFLLLHSNSYTGGLLSSGIFTLPNITRLDLSFNNFSGPLPVEISHMQSLKLLMLSYNQFNGSIPSEFGNMHNLQALDLAFNKLSGPIPPSIGNLSSLLWLMLANNSLTGTIPSELGNCTSLLWLNLANNNLSGKFPRELSKIGRNAMTTFEANRRDGGVTAGSGECLAMKRWIPADYPPFSFVYDILTRKNCRGLWNKLLKGYGIFPFCTPGSSLRLSLISGYVQLSGNKLSGEIPSDIGTMVNFSMLHLGFNSFSGKFPPELGSIPLMVLNLTRNNFSGEIPQEIGNLKCLQNLDLSHNNFSGNFPTSLNKVAELNKFNISYNPFIYGEVSSSGQFVTFEKDSYLGDPLLILPDFIDNTTRNNKNTTFHSDHKKPAKLSAFLVFLAITLVFIIFGFLTIIVCALVKTPSDQYLLKDHTKHCNDSSSSGIGSSQWLSDSVKVIRLNKTAFTYADILIATSSFSENRIIGKGGFGTVYKGVFADGREVAVKKLLSEGPEGEKEFQAEMEVLSGHGFGWPHPNLVTLHGWCLSNSEKILVYEYIEGGSLEDLITDRTRLTWKKRLQVAIDVARALVYLHHECYPSIVHRDVKASNVMLDKEGKAKVTDFGLARVVNVGDSHVSTMVAGTVGYVAPEYGQTMKASTKGDVYSYGVLAMELATGRKAVDGGEECLVEWTRRVMGRKQQTKHQQHHVLSHLGSRLVGGAEEMGELLCIGLKCTNEAPNARPNMKQVLTMLIMISKSNVGDSSSDHGHNV 1100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01230 1100 CDD STKc_IRAK 814 1081 - -
Mepo1g01230 1100 SMART serkin_6 808 1083 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g01230 1100 Gene3D Ribonuclease Inhibitor 560 715 IPR032675 -
Mepo1g01230 1100 Pfam Leucine rich repeat 369 429 IPR001611 GO:0005515
Mepo1g01230 1100 Pfam Leucine rich repeat 273 332 IPR001611 GO:0005515
Mepo1g01230 1100 ProSitePatterns Protein kinases ATP-binding region signature. 814 837 IPR017441 GO:0005524
Mepo1g01230 1100 Gene3D Ribonuclease Inhibitor 368 503 IPR032675 -
Mepo1g01230 1100 Pfam Leucine rich repeat N-terminal domain 34 79 IPR013210 -
Mepo1g01230 1100 Gene3D Ribonuclease Inhibitor 247 367 IPR032675 -
Mepo1g01230 1100 Gene3D Ribonuclease Inhibitor 32 174 IPR032675 -
Mepo1g01230 1100 SUPERFAMILY RNI-like 70 309 - -
Mepo1g01230 1100 FunFam Putative LRR receptor-like serine/threonine-protein kinase 343 504 - -
Mepo1g01230 1100 Gene3D Ribonuclease Inhibitor 175 246 IPR032675 -
Mepo1g01230 1100 SMART LRR_typ_2 295 319 IPR003591 -
Mepo1g01230 1100 SMART LRR_typ_2 392 415 IPR003591 -
Mepo1g01230 1100 SMART LRR_typ_2 368 391 IPR003591 -
Mepo1g01230 1100 SMART LRR_typ_2 105 129 IPR003591 -
Mepo1g01230 1100 SMART LRR_typ_2 440 464 IPR003591 -
Mepo1g01230 1100 SMART LRR_typ_2 416 439 IPR003591 -
Mepo1g01230 1100 Pfam Protein kinase domain 809 1079 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g01230 1100 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 241 336 - -
Mepo1g01230 1100 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 888 1089 - -
Mepo1g01230 1100 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 248 1082 - -
Mepo1g01230 1100 Gene3D Phosphorylase Kinase; domain 1 773 887 - -
Mepo1g01230 1100 SUPERFAMILY L domain-like 569 677 - -
Mepo1g01230 1100 Pfam Leucine Rich Repeat 179 201 IPR001611 GO:0005515
Mepo1g01230 1100 Pfam Leucine Rich Repeat 108 129 IPR001611 GO:0005515
Mepo1g01230 1100 SUPERFAMILY Protein kinase-like (PK-like) 790 1083 IPR011009 -
Mepo1g01230 1100 SUPERFAMILY L domain-like 223 483 - -
Mepo1g01230 1100 ProSiteProfiles Protein kinase domain profile. 808 1083 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g01230 1100 FunFam Leucine-rich repeat receptor protein kinase MSP1 771 887 - -
Mepo1g01230 1100 ProSitePatterns Serine/Threonine protein kinases active-site signature. 930 942 IPR008271 GO:0004672|GO:0006468
Mepo1g01230 1100 Gene3D Transferase(Phosphotransferase) domain 1 888 1097 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01230 Mepo-Chr1 12055676 12059115 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01230 32 1094 Receptor kinase-like Gene Family AT4G39400 33.362 8.91e-153 485
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-2 Mepo1g01230 Pkinase 7.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01230 - - gmx:100816573 1615.9