Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mepo1g01230 | ATGTCAGAGTTGCAGGAAACACATTCCTGTTGCTTCCTATTTTTACTCTCAATTTCCTTCATCCTTCTTTCAGGTAGGTTTGTTGTTGGAGATTCTTTGGACACAGACAAACAAATTCTGTTGAAGTTGAAAAAGTACTTGGACAACAAAACTCTTGCAGACCAAGGAAAGTACATATATTGGGACACAAACAGTTCCAATTCAAATCCATGTGAATGGCAAGGAATTAGGTGTAACAAAGCAAAGAGAGTAATTGGCATAGATCTCTCTTACAGTGACATTACAGGAGAGATATTTCAAAGCTTCTCTCAGCTTACTGAGCTCACACATCTCGATCTCTCGCAGAACACGCTCTTTGGATATATTCCAAATGATTTGAGAAACTGTCACAAGCTATTGCATCTCAATCTCTCTCACAATATTCTTGATGGAGAATTGAATTTGACTGGATTGACATCCTTGCATACACTTGATTTGTCCTTGAATAGATTTCATGGAGAAATTGGGCTATGGAATTTGCCATCCATGTGTGAAAATTTAATCACTTTGAATATCTCAGGCAATAACTTAACTGGTGAGATTGGTAATAGTTTTGATCAATGTTCAAAGTTGAAGTACTTGGATTTGAGCACCAACAAGCTGAGTGGAGGTATATGGAATGGATTTGCAAGGCTTAGGCAGTTTTCTATTGCTGAGAATCATCTCAGTGGAAACATTTCATCTGAAGCTTTTCCATTGAATTGTGAACTTGTGGAATTGGATCTTTGTCAAAATGGGTTTGTTGGCAAAGCACCGAAGGAAATTGCTAACTGCAAGAATCTAACCATGTTGAATCTTTCAAGTAACAATTTTACTGGAGCTATCCCTATTGAAATGGGGTCCATTTCAAGGCTGAAAGGATTGTACTTGGGGGGAAACACCTTTTCAAGAGAAATTCCTGAGGCTCTTTTGAAATTGAATAATTTGGTGTTCTTGGATTTGAGCAGAAACAAATTTGGTGGTGACATACAAAAGATTTTTGGGAAATTTAAACAGGTGAGATTTCTTCTTTTGCACTCTAATTCATACACTGGAGGATTGTTATCATCTGGAATTTTCACATTGCCGAACATTACACGGTTAGACCTAAGCTTCAACAACTTTTCAGGTCCATTACCTGTTGAAATCTCTCATATGCAAAGTCTAAAACTTTTAATGTTATCATATAACCAATTCAATGGATCTATTCCATCAGAATTTGGAAATATGCATAATTTACAAGCACTTGACCTTGCTTTCAACAAGTTGAGTGGACCAATACCTCCAAGCATTGGAAACTTGAGTTCTCTCTTGTGGTTGATGCTTGCAAACAATTCATTAACTGGAACAATCCCTTCAGAGTTAGGGAACTGTACTAGTTTATTATGGTTAAACCTCGCCAACAATAACCTCTCTGGAAAGTTTCCTCGCGAACTTTCTAAAATCGGAAGGAATGCGATGACAACATTTGAAGCAAATAGGCGAGACGGTGGAGTGACTGCTGGATCTGGTGAATGTTTAGCAATGAAGAGATGGATACCTGCAGATTACCCTCCATTCAGCTTTGTGTATGATATTTTAACAAGGAAAAATTGTAGAGGACTTTGGAATAAATTGCTCAAAGGGTATGGAATTTTTCCATTTTGCACACCTGGGTCCTCCCTTAGGTTATCTTTAATATCAGGTTATGTTCAGTTAAGTGGAAACAAGCTAAGTGGTGAAATCCCTTCAGACATTGGAACAATGGTGAATTTCAGTATGTTGCATTTGGGATTCAACAGTTTCTCTGGGAAGTTTCCACCCGAGTTGGGAAGTATTCCACTTATGGTCTTGAACTTGACTAGAAACAACTTTTCAGGTGAAATTCCTCAGGAAATTGGAAACTTGAAATGCTTGCAAAATCTTGATTTGTCTCACAACAATTTCTCAGGAAATTTTCCTACAAGTTTGAACAAAGTGGCTGAGCTTAACAAGTTCAACATCTCCTATAATCCCTTCATATATGGCGAGGTTTCATCAAGTGGACAATTTGTTACTTTTGAGAAAGATTCATATTTAGGTGACCCTTTGTTGATCCTTCCCGACTTCATCGACAACACTACCAGAAACAACAAAAACACGACCTTTCACAGTGACCATAAAAAGCCGGCAAAACTATCCGCGTTCTTGGTTTTTCTGGCCATAACACTTGTTTTTATTATATTTGGCTTTCTAACAATAATAGTCTGTGCATTAGTCAAAACCCCATCAGATCAATATCTCTTGAAGGATCATACAAAACATTGCAATGACTCAAGTAGCTCAGGAATAGGGTCCTCCCAGTGGTTATCTGATTCGGTTAAAGTCATTCGTTTGAACAAAACAGCTTTCACCTATGCAGACATTTTGATAGCAACAAGCAGCTTCTCAGAAAACAGAATCATAGGAAAAGGTGGATTTGGAACAGTATACAAAGGAGTTTTCGCAGACGGTAGAGAAGTGGCAGTGAAGAAGCTTCTAAGCGAAGGACCTGAAGGCGAAAAGGAATTCCAAGCTGAAATGGAAGTTCTAAGTGGCCATGGTTTCGGTTGGCCTCATCCAAACCTCGTCACACTCCACGGTTGGTGTTTAAGCAATTCAGAAAAGATACTTGTTTATGAGTACATAGAAGGTGGAAGCTTAGAAGATCTAATAACCGATAGAACTCGTCTGACATGGAAGAAAAGGCTACAAGTTGCTATCGACGTGGCTCGCGCGCTTGTCTATTTACATCATGAATGTTATCCTTCTATTGTTCATAGAGATGTGAAGGCTAGTAATGTGATGTTAGACAAAGAAGGGAAAGCAAAAGTAACAGATTTTGGATTAGCTAGAGTTGTTAATGTTGGTGATAGTCATGTGAGTACAATGGTTGCTGGAACTGTTGGATATGTTGCACCTGAATATGGACAAACAATGAAAGCTAGTACAAAAGGAGATGTTTATAGTTATGGTGTGTTGGCTATGGAGTTGGCTACAGGTAGAAAAGCAGTAGATGGAGGTGAAGAGTGTTTGGTTGAATGGACAAGGCGTGTCATGGGAAGAAAACAACAAACAAAACATCAACAACATCATGTGTTGAGTCATTTGGGTTCAAGACTTGTTGGTGGGGCAGAGGAGATGGGTGAATTGCTATGTATTGGTTTGAAGTGTACAAATGAGGCACCAAATGCTAGGCCAAATATGAAACAAGTTTTGACTATGCTTATAATGATATCTAAATCTAATGTTGGAGATTCATCAAGTGATCATGGGCACAATGTTTAG | 3303 | 0.3842 | MSELQETHSCCFLFLLSISFILLSGRFVVGDSLDTDKQILLKLKKYLDNKTLADQGKYIYWDTNSSNSNPCEWQGIRCNKAKRVIGIDLSYSDITGEIFQSFSQLTELTHLDLSQNTLFGYIPNDLRNCHKLLHLNLSHNILDGELNLTGLTSLHTLDLSLNRFHGEIGLWNLPSMCENLITLNISGNNLTGEIGNSFDQCSKLKYLDLSTNKLSGGIWNGFARLRQFSIAENHLSGNISSEAFPLNCELVELDLCQNGFVGKAPKEIANCKNLTMLNLSSNNFTGAIPIEMGSISRLKGLYLGGNTFSREIPEALLKLNNLVFLDLSRNKFGGDIQKIFGKFKQVRFLLLHSNSYTGGLLSSGIFTLPNITRLDLSFNNFSGPLPVEISHMQSLKLLMLSYNQFNGSIPSEFGNMHNLQALDLAFNKLSGPIPPSIGNLSSLLWLMLANNSLTGTIPSELGNCTSLLWLNLANNNLSGKFPRELSKIGRNAMTTFEANRRDGGVTAGSGECLAMKRWIPADYPPFSFVYDILTRKNCRGLWNKLLKGYGIFPFCTPGSSLRLSLISGYVQLSGNKLSGEIPSDIGTMVNFSMLHLGFNSFSGKFPPELGSIPLMVLNLTRNNFSGEIPQEIGNLKCLQNLDLSHNNFSGNFPTSLNKVAELNKFNISYNPFIYGEVSSSGQFVTFEKDSYLGDPLLILPDFIDNTTRNNKNTTFHSDHKKPAKLSAFLVFLAITLVFIIFGFLTIIVCALVKTPSDQYLLKDHTKHCNDSSSSGIGSSQWLSDSVKVIRLNKTAFTYADILIATSSFSENRIIGKGGFGTVYKGVFADGREVAVKKLLSEGPEGEKEFQAEMEVLSGHGFGWPHPNLVTLHGWCLSNSEKILVYEYIEGGSLEDLITDRTRLTWKKRLQVAIDVARALVYLHHECYPSIVHRDVKASNVMLDKEGKAKVTDFGLARVVNVGDSHVSTMVAGTVGYVAPEYGQTMKASTKGDVYSYGVLAMELATGRKAVDGGEECLVEWTRRVMGRKQQTKHQQHHVLSHLGSRLVGGAEEMGELLCIGLKCTNEAPNARPNMKQVLTMLIMISKSNVGDSSSDHGHNV | 1100 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mepo1g01230 | 1100 | CDD | STKc_IRAK | 814 | 1081 | - | - | |
Mepo1g01230 | 1100 | SMART | serkin_6 | 808 | 1083 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Mepo1g01230 | 1100 | Gene3D | Ribonuclease Inhibitor | 560 | 715 | IPR032675 | - | |
Mepo1g01230 | 1100 | Pfam | Leucine rich repeat | 369 | 429 | IPR001611 | GO:0005515 | |
Mepo1g01230 | 1100 | Pfam | Leucine rich repeat | 273 | 332 | IPR001611 | GO:0005515 | |
Mepo1g01230 | 1100 | ProSitePatterns | Protein kinases ATP-binding region signature. | 814 | 837 | IPR017441 | GO:0005524 | |
Mepo1g01230 | 1100 | Gene3D | Ribonuclease Inhibitor | 368 | 503 | IPR032675 | - | |
Mepo1g01230 | 1100 | Pfam | Leucine rich repeat N-terminal domain | 34 | 79 | IPR013210 | - | |
Mepo1g01230 | 1100 | Gene3D | Ribonuclease Inhibitor | 247 | 367 | IPR032675 | - | |
Mepo1g01230 | 1100 | Gene3D | Ribonuclease Inhibitor | 32 | 174 | IPR032675 | - | |
Mepo1g01230 | 1100 | SUPERFAMILY | RNI-like | 70 | 309 | - | - | |
Mepo1g01230 | 1100 | FunFam | Putative LRR receptor-like serine/threonine-protein kinase | 343 | 504 | - | - | |
Mepo1g01230 | 1100 | Gene3D | Ribonuclease Inhibitor | 175 | 246 | IPR032675 | - | |
Mepo1g01230 | 1100 | SMART | LRR_typ_2 | 295 | 319 | IPR003591 | - | |
Mepo1g01230 | 1100 | SMART | LRR_typ_2 | 392 | 415 | IPR003591 | - | |
Mepo1g01230 | 1100 | SMART | LRR_typ_2 | 368 | 391 | IPR003591 | - | |
Mepo1g01230 | 1100 | SMART | LRR_typ_2 | 105 | 129 | IPR003591 | - | |
Mepo1g01230 | 1100 | SMART | LRR_typ_2 | 440 | 464 | IPR003591 | - | |
Mepo1g01230 | 1100 | SMART | LRR_typ_2 | 416 | 439 | IPR003591 | - | |
Mepo1g01230 | 1100 | Pfam | Protein kinase domain | 809 | 1079 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Mepo1g01230 | 1100 | FunFam | LRR receptor-like serine/threonine-protein kinase ERECTA | 241 | 336 | - | - | |
Mepo1g01230 | 1100 | FunFam | Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 | 888 | 1089 | - | - | |
Mepo1g01230 | 1100 | PANTHER | LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED | 248 | 1082 | - | - | |
Mepo1g01230 | 1100 | Gene3D | Phosphorylase Kinase; domain 1 | 773 | 887 | - | - | |
Mepo1g01230 | 1100 | SUPERFAMILY | L domain-like | 569 | 677 | - | - | |
Mepo1g01230 | 1100 | Pfam | Leucine Rich Repeat | 179 | 201 | IPR001611 | GO:0005515 | |
Mepo1g01230 | 1100 | Pfam | Leucine Rich Repeat | 108 | 129 | IPR001611 | GO:0005515 | |
Mepo1g01230 | 1100 | SUPERFAMILY | Protein kinase-like (PK-like) | 790 | 1083 | IPR011009 | - | |
Mepo1g01230 | 1100 | SUPERFAMILY | L domain-like | 223 | 483 | - | - | |
Mepo1g01230 | 1100 | ProSiteProfiles | Protein kinase domain profile. | 808 | 1083 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Mepo1g01230 | 1100 | FunFam | Leucine-rich repeat receptor protein kinase MSP1 | 771 | 887 | - | - | |
Mepo1g01230 | 1100 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 930 | 942 | IPR008271 | GO:0004672|GO:0006468 | |
Mepo1g01230 | 1100 | Gene3D | Transferase(Phosphotransferase) domain 1 | 888 | 1097 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mepo1g01230 | Mepo-Chr1 | 12055676 | 12059115 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mepo1g01230 | 32 | 1094 | Receptor kinase-like Gene Family | AT4G39400 | 33.362 | 8.91e-153 | 485 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-Xb-2 | Mepo1g01230 | Pkinase | 7.2e-47 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mepo1g01230 | - | - | gmx:100816573 | 1615.9 |