Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01222 ATGGAAGAAGATCAAATTCAAGAATTCAAACATGCTTGCAAATTCTGTAGTAAAAGCTTTCCTTGTGGTAGATCTTTAGGAGGTCACATGAGGTCTCATATCAACAACTTATCAGCTGAAAAAACAGAACAAAAAGAAAAGCATATATCTTCAACAAAAAAGAATGATAGCATTGGTTCTGAAGCTGCAACTAATGGTAGCTATGGTCTAAGAGAGAATCCAAAGAAGACATGGAGAAAGAGAATTGCAGATTCAAGTGAAGATAGTTATGTGTATGACAAATTCTGCAAAGAGTGTGGAAAATGTTTTCACTCTTGGCAAGCTTTGTTTGGTCACATGAAGTGTCATTCAGAGAAAGAAAGAGTTTCTATCAGCTTGGAGGATCAAGATTCATGGACTAATAATGCTAAAGATGTTCAATCAGACAATGAAATCACTGCTCCAAATAGGAAGAAAAGATCAAAGAGAACAAGAACAAGGTATAATATGCTAGCTGCTGCAACAGCTTCTTCTTCTGTTTCTGAGGTTGAACATGAGCAAGAAGAAGTTGCTATGAGCTTGATTATGCTTAGTAAAGATGTTAGTCCTTGGAGTGGTCTTCATTATCTTGCTGCTGAATCCTCTGATAATAACTCTGTTTACTTTGAAGCTCGATCTTCCGTTCGAACTAATCTTGTTACAAAATTTGATGCTAATATTGCAAAGTTGATGAAGCAAAGTGAGAACAAGAAGTGTGAGTTAGGCAATTTGAAGTTCAAAGGGAAAAGTTTAGAGCTTTTGGATACTGAAAAAGGATTCAAGATGATCAAAACTGGAGTTTCCATCAAAGGGTTTCTCAAATCCACAAAATCTGAGCTTGATTATCTGTCTACATTGGAAGATTCAGAAGTTGAAAATGGGAAAATCAGAGTCAATGAAGATGAATTTATCAAGAATTTTAATAAGAGAGGAAAGTTTGAGTGTACTACTTGTAACAAAATCTTTCATTCTTATCAAGCTCTTGGAGGTCATAGAGCTAGTCATAAAAAGAACAAAGGGTGTTTTGCTTCTAAGATTGAGAGCAGTGAAAACAGCATTGAATTTGAAACTGATCTCTCTCATGAACCAACAACTGAAAGCAAGCTCATGAAGATAAGTGATAACATTGAATATGTTCAAAATATGGGAGAAAGAGTTAGAGATTCCAAGAAGAAGATTAAAGGGCATCATGAGTGTCCAATTTGCTTTAAGGTTTTTCAATCTGGTCAAGCCTTAGGTGGACATAAAAGATCTCATATGGTTACTGCTGGTTCTGAGAGTAGACTTGTACTTGAGGAACAAGTTCCACAGATTAGGGACTTTCTTGATCTTAATCTTCCTGCTGCTACTGAGGAAGAAAGTAATAGTCATGCTGATTCTAACAGACCTTGGTGGATAGTTGAAGGCAAACATAATCAAGAGGCACTGGTAGGGTAG 1455 0.3615 MEEDQIQEFKHACKFCSKSFPCGRSLGGHMRSHINNLSAEKTEQKEKHISSTKKNDSIGSEAATNGSYGLRENPKKTWRKRIADSSEDSYVYDKFCKECGKCFHSWQALFGHMKCHSEKERVSISLEDQDSWTNNAKDVQSDNEITAPNRKKRSKRTRTRYNMLAAATASSSVSEVEHEQEEVAMSLIMLSKDVSPWSGLHYLAAESSDNNSVYFEARSSVRTNLVTKFDANIAKLMKQSENKKCELGNLKFKGKSLELLDTEKGFKMIKTGVSIKGFLKSTKSELDYLSTLEDSEVENGKIRVNEDEFIKNFNKRGKFECTTCNKIFHSYQALGGHRASHKKNKGCFASKIESSENSIEFETDLSHEPTTESKLMKISDNIEYVQNMGERVRDSKKKIKGHHECPICFKVFQSGQALGGHKRSHMVTAGSESRLVLEEQVPQIRDFLDLNLPAATEEESNSHADSNRPWWIVEGKHNQEALVG 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01222 484 MobiDBLite consensus disorder prediction 39 54 - -
Mepo1g01222 484 ProSiteProfiles Zinc finger C2H2 type domain profile. 319 346 IPR013087 -
Mepo1g01222 484 MobiDBLite consensus disorder prediction 133 156 - -
Mepo1g01222 484 ProSiteProfiles Zinc finger C2H2 type domain profile. 94 121 IPR013087 -
Mepo1g01222 484 Gene3D Classic Zinc Finger 2 67 - -
Mepo1g01222 484 ProSitePatterns Zinc finger C2H2 type domain signature. 321 341 IPR013087 -
Mepo1g01222 484 Gene3D Classic Zinc Finger 316 425 - -
Mepo1g01222 484 ProSitePatterns Zinc finger C2H2 type domain signature. 96 116 IPR013087 -
Mepo1g01222 484 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 1 471 - -
Mepo1g01222 484 MobiDBLite consensus disorder prediction 55 71 - -
Mepo1g01222 484 SUPERFAMILY beta-beta-alpha zinc fingers 8 36 IPR036236 -
Mepo1g01222 484 ProSiteProfiles Zinc finger C2H2 type domain profile. 11 38 IPR013087 -
Mepo1g01222 484 SMART c2h2final6 403 425 IPR013087 -
Mepo1g01222 484 SMART c2h2final6 94 116 IPR013087 -
Mepo1g01222 484 SMART c2h2final6 319 341 IPR013087 -
Mepo1g01222 484 SMART c2h2final6 11 33 IPR013087 -
Mepo1g01222 484 ProSitePatterns Zinc finger C2H2 type domain signature. 405 425 IPR013087 -
Mepo1g01222 484 ProSiteProfiles Zinc finger C2H2 type domain profile. 403 425 IPR013087 -
Mepo1g01222 484 SUPERFAMILY beta-beta-alpha zinc fingers 95 341 IPR036236 -
Mepo1g01222 484 ProSitePatterns Zinc finger C2H2 type domain signature. 13 33 IPR013087 -
Mepo1g01222 484 MobiDBLite consensus disorder prediction 39 72 - -
Mepo1g01222 484 Pfam C2H2-type zinc finger 11 33 - -
Mepo1g01222 484 Pfam C2H2-type zinc finger 319 343 - -
Mepo1g01222 484 Pfam C2H2-type zinc finger 402 426 - -
Mepo1g01222 484 Pfam C2H2-type zinc finger 96 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01222 Mepo-Chr1 11966353 11968219 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01222 4 458 C2H2 Transcription Factor Family AT1G26610 33.467 1.05e-58 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mepo1g01222 zf-C2H2_6 4.6e-11 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01222 - - tpra:123887209 736.102