Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01211 ATGGCATCGACGGCGAAGCGATGCCACTACGAAGTTCTCGGTCTATCTCGCGAATGCTCACCGGAAGAACTCCGATCAGCTTACCGGAAACTCGCCCTCCAACGCCACCCTGACAAGCTCGTCAAATCAGGCCTCTCTCAATCCGAAGCCACCGCTCAGTTTCAGGAGCTACAACACGCTTATGAGGTACTCTCCGATCCAAAGGAACGAGCTTGGTACGATTCTCACCGTTCCCAAATCCTCTTTTCCGATCCAAATTCCAAGTCTAATTCCGTTGTCCCTGACCTGTTCTCGTTTTTCTCCAATACCGTTTATTCGGGGTTTTCGGATTCCGGTAAAGGTTTTTATAAGGTTTATTCTGATGTGTTTGATAAAATTCAGGCGAATGAGATTAATTTTGCTAAGAAATTAGGTTTAGGGATTGATTCTGTTAGACAGGCTCCTCTTATGGGGAATTTGGATAGTCCTTATGCGCAGGTTACAGCTTTTTATAGTTATTGGTTGGGATTTTTGACGGTTATGGATTTTTGTTGGGCGGATGAGTATGATGCGATGGCAGGTCCGAATAGGAAGTCGCGGAGGTTGATGGAGGAAGAGAATAACAAGGTGAAGAAGAATTTGGAGATGGAGAAGAAGAAAGAGGAGGAGAAGGAGAGGAAAAGGAAGTTGGAGATGGAGAAGAAGGAGAGGGCTATGGCTTATGAGGAGCCTGATTGGGCTAAGGTTGATGAAGAAGAGGTTGAGGATTTGTATGAGGATGATGAGTTTGAGAAGAAAGATGAGAAGGAGTTTTATTGTGTGTTGTGTGGGAAGAAGTTTAAGAGTGAGAAGCAATGGAAGAATCATGAGCAGAGTAAGAAGCATAAGGAGAAAGTTGCCGAGTTCAAGGATTCACTTGATGATGAAGAGGAGTTAGAAGCTGAGGTGGACGAGGAAGGTGAAAGTGAAAGAGAAGGGGTTGACGGGGAAAGATTGGAAAGTGACGAGGATGGAGTCGGGGTTGATGATTTGGAGGAGAGGATTCGAGATAGTCTTCATGTTGAGGAGAGTGCAAACGGGGTTGAACTGAATGATGATGGTGACGATGATGAATTTTTTGATGCTGAGCATGCAAAAGATGAGGAGGAGACTGGTGCGTCAGTTGATTCTGTTGTTAATGACGATGACGACGACGATGATGATGAGAATGATGTTCTTGAAACAATGGTATCTGGGCACAAGGGCCGATTTGATTTTGATGAGAATGATGGTAACGACGACGATGTTGATGATGATGAAATTGGGGTTCTTGAAGCAATGCTGGCTGGACGTAAGAGCAGAAAACCCAGTGCTTCAACACACAAGCCCGAGGCTTCTGAAACTCCAACTCAAATTGAGAGTGAGAATGAGAATGATGGGGTTGGTGCTATGGAATATAACAACCGAAAGCCTGCAAAAAAGAAACGTAGAGCAAAGAAAGAGAAGGGTGGGAAAAATGGGGATGGAACTAATGTGCCTACTGATGGCAAATATGAGAAGAATGTAATCAATATTGGAGACGGTGATTCTTGTGCACAAGAGTCTAGTTCCCAATATTTCGAGGAAAATGAGGATAACGGCGGTAAAGAGAATGAGCAGGTGGGTAGAGATAAGAAGAAGATTTCAAATCAACCGGTTGATAAAAAAGGAACTTCAAAGAACACAAAACCCAGATCAAAACTTTCAACCAGAGGAAGAAAACCAAATAGAAATCTTGGTCATTTTTGCGAGACATGTGAGGAGGAGTTTGAGTCAAGGAATAAGTTACATAAACATCTGAGCGACTCTGGGCATGCAGCAATGAAAAGTCGATAA 1833 0.437 MASTAKRCHYEVLGLSRECSPEELRSAYRKLALQRHPDKLVKSGLSQSEATAQFQELQHAYEVLSDPKERAWYDSHRSQILFSDPNSKSNSVVPDLFSFFSNTVYSGFSDSGKGFYKVYSDVFDKIQANEINFAKKLGLGIDSVRQAPLMGNLDSPYAQVTAFYSYWLGFLTVMDFCWADEYDAMAGPNRKSRRLMEEENNKVKKNLEMEKKKEEEKERKRKLEMEKKERAMAYEEPDWAKVDEEEVEDLYEDDEFEKKDEKEFYCVLCGKKFKSEKQWKNHEQSKKHKEKVAEFKDSLDDEEELEAEVDEEGESEREGVDGERLESDEDGVGVDDLEERIRDSLHVEESANGVELNDDGDDDEFFDAEHAKDEEETGASVDSVVNDDDDDDDDENDVLETMVSGHKGRFDFDENDGNDDDVDDDEIGVLEAMLAGRKSRKPSASTHKPEASETPTQIESENENDGVGAMEYNNRKPAKKKRRAKKEKGGKNGDGTNVPTDGKYEKNVINIGDGDSCAQESSSQYFEENEDNGGKENEQVGRDKKKISNQPVDKKGTSKNTKPRSKLSTRGRKPNRNLGHFCETCEEEFESRNKLHKHLSDSGHAAMKSR 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01211 610 Pfam Zinc-finger double-stranded RNA-binding 264 289 IPR022755 -
Mepo1g01211 610 ProSiteProfiles dnaJ domain profile. 8 77 IPR001623 -
Mepo1g01211 610 SUPERFAMILY beta-beta-alpha zinc fingers 254 307 IPR036236 -
Mepo1g01211 610 MobiDBLite consensus disorder prediction 576 610 - -
Mepo1g01211 610 ProSitePatterns Nt-dnaJ domain signature. 54 73 IPR018253 -
Mepo1g01211 610 Coils Coil 193 229 - -
Mepo1g01211 610 MobiDBLite consensus disorder prediction 299 317 - -
Mepo1g01211 610 SUPERFAMILY Chaperone J-domain 5 104 IPR036869 -
Mepo1g01211 610 Pfam DnaJ domain 9 74 IPR001623 -
Mepo1g01211 610 SMART ZnF_U1_5 261 295 IPR003604 GO:0003676|GO:0008270
Mepo1g01211 610 ProSitePatterns Zinc finger C2H2 type domain signature. 582 604 IPR013087 -
Mepo1g01211 610 MobiDBLite consensus disorder prediction 380 398 - -
Mepo1g01211 610 ProSiteProfiles Zinc finger C2H2 type domain profile. 264 293 IPR013087 -
Mepo1g01211 610 MobiDBLite consensus disorder prediction 448 463 - -
Mepo1g01211 610 MobiDBLite consensus disorder prediction 354 370 - -
Mepo1g01211 610 ProSitePatterns Zinc finger C2H2 type domain signature. 266 288 IPR013087 -
Mepo1g01211 610 MobiDBLite consensus disorder prediction 276 298 - -
Mepo1g01211 610 SMART dnaj_3 7 69 IPR001623 -
Mepo1g01211 610 Gene3D Classic Zinc Finger 253 312 - -
Mepo1g01211 610 MobiDBLite consensus disorder prediction 196 221 - -
Mepo1g01211 610 Coils Coil 285 312 - -
Mepo1g01211 610 ProSiteProfiles Zinc finger C2H2 type domain profile. 580 609 IPR013087 -
Mepo1g01211 610 MobiDBLite consensus disorder prediction 335 353 - -
Mepo1g01211 610 PANTHER DNAJ PROTEIN JJJ1 HOMOLOG 1 205 IPR044648 -
Mepo1g01211 610 CDD DnaJ 8 66 IPR001623 -
Mepo1g01211 610 Gene3D DnaJ domain 1 93 IPR036869 -
Mepo1g01211 610 MobiDBLite consensus disorder prediction 399 414 - -
Mepo1g01211 610 MobiDBLite consensus disorder prediction 514 528 - -
Mepo1g01211 610 PRINTS DnaJ domain signature 10 28 IPR001623 -
Mepo1g01211 610 PRINTS DnaJ domain signature 49 69 IPR001623 -
Mepo1g01211 610 PRINTS DnaJ domain signature 28 43 IPR001623 -
Mepo1g01211 610 SMART c2h2final6 264 288 IPR013087 -
Mepo1g01211 610 SMART c2h2final6 580 604 IPR013087 -
Mepo1g01211 610 MobiDBLite consensus disorder prediction 276 610 - -
Mepo1g01211 610 MobiDBLite consensus disorder prediction 529 560 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01211 Mepo-Chr1 11841891 11845087 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01211 1 610 C2H2 Transcription Factor Family AT1G74250 44.234 5.08e-154 455
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mepo1g01211 DnaJ 3.9e-21 CL0392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01211 K09506 - gmx:100788305 632.098