Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01204 ATGAGACTATATGAGAATTCTGAGGTGGAAGAGGTTGCCAATGAAGCTGCTTTTGTTCCAAAGATTAAATATAATTTTGTCCCACTGGATCAGTTGGGTCCTCATGCCAATCAGCCTGATCTTGTTAGTATGGATTCTGAAGGTAAGGATGCTGGAATGGTTGCTTTAAGGTCTGGTTCAATTCCATCATCTAACAGTGGAAGTAGATCATTGTACTCTGACTGTGTTCCACTTTCTCACATTACCTCTAACCCCTCCTTGGGGGCTGAGAAGTATCAGAGGATATATATCAGTTTCATAAGGCCAGATCAGGAGATGTGGTATTGTGCCTGTAAGACTTGCAACAAGAAACTTACTGAAAGCATGGGTGATGGATATAGTATGGTTGCAAGAGTTTCTGATGCAAGTGGCGAGGTTTATATATCTATCTTCAATGAGGAAGCTGAGAAGATCATTGGGTGCTCTGCTGATGAGCTAGATGACCTTAGATCACAGGAGGGAGAAGAGAATCCATATCTAATGAAATTGAAGAAAGCTACATGGATTCCACACCTCTTGGTCAGTGTTTCTCAGAATGAGTACAACAACGAGAAGAGGCAAAAGATTACAGCCGTGGCAGTTGTTTCTGTTGACTTGGCAGCGGAGTCGAAATTTCTCCTTGAAGACATATCAAAGATGACAGCCTCTCAATAA 693 0.4185 MRLYENSEVEEVANEAAFVPKIKYNFVPLDQLGPHANQPDLVSMDSEGKDAGMVALRSGSIPSSNSGSRSLYSDCVPLSHITSNPSLGAEKYQRIYISFIRPDQEMWYCACKTCNKKLTESMGDGYSMVARVSDASGEVYISIFNEEAEKIIGCSADELDDLRSQEGEENPYLMKLKKATWIPHLLVSVSQNEYNNEKRQKITAVAVVSVDLAAESKFLLEDISKMTASQ 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01204 230 SUPERFAMILY Nucleic acid-binding proteins 74 226 IPR012340 -
Mepo1g01204 230 Gene3D - 66 226 IPR012340 -
Mepo1g01204 230 Pfam Replication factor-A C terminal domain 126 219 IPR013955 -
Mepo1g01204 230 CDD RPA1_DBD_C 97 225 IPR047192 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01204 Mepo-Chr1 11796503 11798285 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01204 1 42 Core DNA Replication Machinery Family AT5G08020 59.524 3.59e-11 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01204 K07466 - qsu:112017680 239.965