Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01194 ATGAACGGGCTAAGAGGCGAAAGAGCACCTCTTTTGGAGGCTGAGCGCGGTGGTGTAAGGGGAAAGAAACGCGACGATTCCACGGCAGCAGATCAAGTATCAGACCTTGAACATGGTGATGGCGTACCGGCTGCACATGTGGGTTTCTTTAGAGTCTTTTCACTTGCAAAGCCTGAGGCTGGAAAATTGGTCATTGCTACGGTAGCTCTGTTGATTGCAGCCACGTCAAGTACCTTAGTTCAAAAATTTGGTGGGAAGATAATTGACATTGTCTCAGGAGATATAAGAACACCTGAGGAGAAAGATGCAGCATTAGAAGCTGTCAAGAACACCATACTAGAAATCTTTCTCATTGTTGTCATCGGTTCAGTTTGCTCCGCACTTCGAGCCTGGCTTTTTTATTCTGCCAGCGAAAGGGTTGTTGCGCGGCTAAGGAAGAATTTGTTCAGTCACCTTGTAAACCAGGAAATAGCTTTCTTTGATGTTACACGGACCGGGGAACTTTTAAGTAGGCTATCTGAAGATACACAGATCATTAAGAATGCTGCAACTACCAACCTCTCAGAGGCCTTGAGAAACTTGTCAACTGCATTTATTGGTCTCAGCTTCATGTTTGCAACATCATGGAAGTTAACGTTATTGGCTCTGGCTGTTGTACCTGTTATTTCTGTCGCTGTTCGTCAATTTGGTCGTTTCCTGCGTGAACTCTCTCATAAAACTCAAGCTGCAGCTGCAGTAGCTTCTTCAATTGCCGAGGAATCCTTTGGTGCAATAAGAACAGTTAGATCTTTTGCTCAGGAAGATTATGAAATAGAACGCTACTCTGAGAAAGTTAACGAGACTCGATCACTTGGACTTAAACAGGCTAAAGTTGTTGGACTCTTCTCCGGAGGTCTTAACGCAGCATCTACACTTTCAGTTATTGTAGTTGTTATATATGGAGCTAATTTGACGATCAAGGGTTCCATGACCTCGGGTGATCTTACATCTTTCATTCTTTATAGTCTCTCAGTTGGATCTTCTATATCTGGTTTGTCGGGATTGTATACTGTAGTTATGAAAGCTGCCGGCGCTAGCAGAAGGGTATTTCAACTGTTGGATCGTGCCTCATCAATGCCTAAGGCAGGAGATAAATGTCCTCTGGGTGATCATGATGGGGAAGTGGAACTAAATGATGTATGGTTTTCCTATCCATCACGCCCTAATCATATGGTGCTCAAGGGCATTAATATAAAACTGCAACCTGGCTCAAAGGTTGCTCTTGTTGGTCCAAGCGGTGGCGGAAAGACTACAATTGCAAACTTAATTGAAAGATTTTATGACCCAACTAAGGGAAATATTCTCGTGAATGGTGTTCCTCTGGTAGAGATATCACACAAACATTTACACAGAAAGATCAGCATAGTTAGTCAGGAGCCTACACTCTTCAATTGTTCCATAGAGGAGAACATAGCTTATGGATTTGATGGCAAAATTGAGGACGCTGATATTGAAAATGCAGCTAAAATGGCCAACGCGCACGAATTTATATCAAATTTCCCAGAAAAATACAAGACCTTTGTTGGAGAACGAGGCATTAGGCTTTCCGGAGGACAGAAACAGAGAATAGCAATTGCTAGAGCGTTGCTTATGGACCCAAAAATTCTCTTACTGGATGAAGCCACCAGTGCCTTAGATGCTGAAAGCGAATACTTGGTGCAGGATGCTATGGATTCTATCATGAAGGGAAGGACAGTTCTAGTCATTGCTCATAGGTTATCAACTGTTAAAACTGCTAATACAGTTGCAGTTGTTTCTGATGGTCAAATAGTTGAGAGTGGCACTCATGACGAGCTTCTCGAGAAGAATGGTGTTTATACTGCATTAGTCAAGAGACAACTACAGACAACAAAAACCGAAATCTAA 1905 0.4268 MNGLRGERAPLLEAERGGVRGKKRDDSTAADQVSDLEHGDGVPAAHVGFFRVFSLAKPEAGKLVIATVALLIAATSSTLVQKFGGKIIDIVSGDIRTPEEKDAALEAVKNTILEIFLIVVIGSVCSALRAWLFYSASERVVARLRKNLFSHLVNQEIAFFDVTRTGELLSRLSEDTQIIKNAATTNLSEALRNLSTAFIGLSFMFATSWKLTLLALAVVPVISVAVRQFGRFLRELSHKTQAAAAVASSIAEESFGAIRTVRSFAQEDYEIERYSEKVNETRSLGLKQAKVVGLFSGGLNAASTLSVIVVVIYGANLTIKGSMTSGDLTSFILYSLSVGSSISGLSGLYTVVMKAAGASRRVFQLLDRASSMPKAGDKCPLGDHDGEVELNDVWFSYPSRPNHMVLKGINIKLQPGSKVALVGPSGGGKTTIANLIERFYDPTKGNILVNGVPLVEISHKHLHRKISIVSQEPTLFNCSIEENIAYGFDGKIEDADIENAAKMANAHEFISNFPEKYKTFVGERGIRLSGGQKQRIAIARALLMDPKILLLDEATSALDAESEYLVQDAMDSIMKGRTVLVIAHRLSTVKTANTVAVVSDGQIVESGTHDELLEKNGVYTALVKRQLQTTKTEI 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01194 634 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 64 354 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo1g01194 634 MobiDBLite consensus disorder prediction 1 37 - -
Mepo1g01194 634 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 379 626 IPR027417 -
Mepo1g01194 634 PIRSF ABC_prm/ATPase_B 16 634 - -
Mepo1g01194 634 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 48 631 IPR039421 -
Mepo1g01194 634 Pfam ABC transporter 406 556 IPR003439 GO:0005524
Mepo1g01194 634 Pfam ABC transporter transmembrane region 63 336 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo1g01194 634 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 388 625 IPR003439 GO:0005524
Mepo1g01194 634 ProSitePatterns ABC transporters family signature. 528 542 IPR017871 GO:0005524|GO:0016887
Mepo1g01194 634 SMART AAA_5 415 609 IPR003593 GO:0016887
Mepo1g01194 634 Gene3D ABC transporter type 1, transmembrane domain 115 385 IPR036640 GO:0005524|GO:0016020
Mepo1g01194 634 FunFam ABC transporter B family member 25 115 385 - -
Mepo1g01194 634 SUPERFAMILY ABC transporter transmembrane region 51 368 IPR036640 GO:0005524|GO:0016020
Mepo1g01194 634 CDD ABC_6TM_AtABCB27_like 66 362 - -
Mepo1g01194 634 MobiDBLite consensus disorder prediction 9 33 - -
Mepo1g01194 634 FunFam ABC transporter B family member 25 386 628 - -
Mepo1g01194 634 CDD ABC_MTABC3_MDL1_MDL2 388 626 - -
Mepo1g01194 634 Gene3D - 386 631 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01194 Mepo-Chr1 11697817 11702775 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01194 49 634 Calmodulin-binding Proteins AT2G36910 33.893 5.40e-94 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01194 - - gmx:100810510 1063.91