Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01180 ATGCAGGAGATACAGCATTCCATCGGAGGCGCCGGAGGAACCAGATTCTTCGGCGGCGGAGGTGGTGATCGGCGTCTCAGACCCAACCAAAACAACAATAACCTGAACCAAGAAGTCATGAAATGTCCTCGCTGTGACTCCATCAACACCAAATTCTGTTACTACAATAACTACAATCTCTCTCAGCCTCGCCACTTTTGCAAAAACTGCCGCCGTTACTGGACTAAAGGCGGTGTCCTCCGTAACGTCCCCGTCGGTGGTGGTTGCCGGAAATCCAAACGCTCCAGCAAACCAAAAAAATCTTCCTCCTCAGATTCCACTGTTTTACCGACAACTCCACCTGAGGCGCCGGAGAATAAGTCTAACTCTCATTCTAGTAGTGAGAGTTCCAGCCTAACCGCCGCTGCGGTGACTGAAACAGTTTCTGAACCAACGCCACCGCCGGAGAAGAAAATCAACAAAGGTTTTGAGAATGATTCACTGGAACAAGGAACAGGTGATTGTGGTATATTCTCAGAGATCGCAACTTTCACAAGCTTGATCACTTCCTCTAACGAGACATTGCCGTTTGGATTTGGTGTTATCGGTAACGATAGCCGTAACGGTAATGTTAGTGTTAACGGTTTTAATGATGCGTCGTTTCAGTGGCAAAACCAAAAGCTGATGACTGTTACAGGCGATCAAAAACATCATGAAGAAGACGCATTGAAGTTGTTACCGGAGAATACAGGTGCTGGTGCTGGTGGAGGTGGTTCTTCTGGTTCTGGATCGTTGCTGGACCATGGTATTGATTTCTCTTTGCTACAGAGTAAAACAAGCAACGGTGGATTTGGATCGTTGGATTGGAATGGTGATGGTGGTGCTGATCATCAAGGTTTGTTTGATCTTCCTAACACCGTTGATCATGGTTACTGGAATCACACTCAATGGTCTGATCAGGATCATTCTTCTCTCTTTCATCTTCCTTGA 969 0.4665 MQEIQHSIGGAGGTRFFGGGGGDRRLRPNQNNNNLNQEVMKCPRCDSINTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRKSKRSSKPKKSSSSDSTVLPTTPPEAPENKSNSHSSSESSSLTAAAVTETVSEPTPPPEKKINKGFENDSLEQGTGDCGIFSEIATFTSLITSSNETLPFGFGVIGNDSRNGNVSVNGFNDASFQWQNQKLMTVTGDQKHHEEDALKLLPENTGAGAGGGGSSGSGSLLDHGIDFSLLQSKTSNGGFGSLDWNGDGGADHQGLFDLPNTVDHGYWNHTQWSDQDHSSLFHLP 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01180 322 MobiDBLite consensus disorder prediction 85 159 - -
Mepo1g01180 322 MobiDBLite consensus disorder prediction 1 36 - -
Mepo1g01180 322 ProSitePatterns Zinc finger Dof-type signature. 42 78 IPR003851 GO:0003677|GO:0006355
Mepo1g01180 322 ProSiteProfiles Zinc finger Dof-type profile. 40 94 IPR003851 GO:0003677|GO:0006355
Mepo1g01180 322 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 31 207 IPR045174 GO:0003700|GO:0006355
Mepo1g01180 322 Pfam Dof domain, zinc finger 38 94 IPR003851 GO:0003677|GO:0006355
Mepo1g01180 322 MobiDBLite consensus disorder prediction 101 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01180 Mepo-Chr1 11558940 11560557 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01180 23 322 C2C2-Dof Transcription Factor Family AT5G60850 42.857 2.14e-55 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mepo1g01180 zf-Dof 2.2e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01180 - - mtr:25493917 531.946
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g01180 1 11558940 11560557 Mepo6g02389 6 32599558 32600211 PCT