Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01177 ATGGAGCTTCCTCAAGCACGTTCTTATGGTGCCGAAGGAGCAGGGAGGAAATCGACGCATGATTTTCTGTCACTATACAGTAATTCAACTGCCGAACAAGATCCAAGGCCATCTGCTCAAGCAAGTTTCCTCAAGACCCATGATTTCTTGCGGCCACTAGAGGAGGTAGAAGCCAAATCCAGTGCCAAGGAAGAAGCCACAGATGAAATCTCATCGGTGGTTGAGAAGCAACCCCCTTTAGCAACACCAGCTTCAGTTGAGCACCTCTTACCTGGAGGAATTGGGACTTACAGTATCAGTCACATTAATTCCTGCGTGAATAATAATCAAAGGGTTCCAAAGCCAGAAGCATCATCACTTTTCACTGTGCATCAAGCAACTAGTGCTGATAGAAATGATGACAACTCCAACTGCAGTTCACATACTTCAAGCGGTTTCACATTGTGGGAAGAGTCTGAGATTAGAAAGGGAAAGACAGGAAAGGAGAATAATGTTGGGGATAAACCCATTATAGGAGATTCTGCTGCTAAGTTAGGGCAGTGGACATTGAAGGAGCGAACGTCTCAATCGTTTTCTAACAATCATCATGGCAGCTTCAACTCTCGCTCTTCATCTCAGACAACTGGACAGAAGAACCAGAGTTTTATGGAAATGATGAAATCTGCACAGGATTGTGCCCAGGATGAAGAGCTAGAAAATGAAGGAACGTTTTTTCTCAAGAGAGAATCCTCGAATGTTCAAAGAGGAGAACTAAGGGTAAGAGTGGACGGCAAGAGTACCGATCAAAAGCCAAACACACCAAGATCAAAACATTCTGCAACAGAGCAGCGAAGAAGAAGCAAAATTAATGACAGGTTTCAGATGCTACGAGAGCTTATTCCACACAGTGATCAAAAGAGGGACAAAGCATCTTTTTTGTTAGAGGTCATTGAGTACATTCACTTTTTACAAGAGAAGGTTCATAAGTATGAAGGTTCATTCCAAGGTTGGAATAACGAGCCAGAAAAACAGATGCCATGGAGAAATAATGACAGGCCAGCAGAAAGTTTTCAACCTCGTGGCGCAAATGGTGGGTCTAATCCATCTCCAACATTGCTGTTTGCTTCAAAGGTTGACGAGAAAAACATCACCATCTCCCCAACAGCTCATGGGGGTATCCATAATGTCGAATCTAGCTTGAGCACAACAACTGCCTTGAAGACAATAGATCATCCGTCTGGAATAACAAACAAGGCTTTTCCAAGTCCTATTTCTTCCCAACCAAATTTCTTAACTTCAACCCAAATCGGAGGTTTAGGTGGAGCAGTGTCTCAGCTCAGACGTAGATTAGCATCTGATGCAGAGAACACCAATTATCAACCTTCAGTAGAATCTCAGACTATGACTTCAACCAGTGAAAAGCTGAAAGAGAAAGAGCTCACCATTGAAGGAGGTGCCATTAGCATATCAAGTGTGTACTCGCAAGGGTTGTTGGATACACTTACACAAGCCTTGCAGAGTTCAGGAGTGGATTTATCACAGGCTAGCATTTCCGTGCAAATTGAACTTGGTAAACAAGCAAGCCTCAGACCAAACATACCAATGCCAATGTGTGTTTCCAAGGATGATGAAGATCCTTCTAAGAATCAAAGGAAGATGCGCTCTGGCTCTAGAGTCACTGGCTCTGAGAAGTCTGATCAAGCACTAAAGAAGCTGAAAATGTGCAGAAGTTAA 1713 0.4332 MELPQARSYGAEGAGRKSTHDFLSLYSNSTAEQDPRPSAQASFLKTHDFLRPLEEVEAKSSAKEEATDEISSVVEKQPPLATPASVEHLLPGGIGTYSISHINSCVNNNQRVPKPEASSLFTVHQATSADRNDDNSNCSSHTSSGFTLWEESEIRKGKTGKENNVGDKPIIGDSAAKLGQWTLKERTSQSFSNNHHGSFNSRSSSQTTGQKNQSFMEMMKSAQDCAQDEELENEGTFFLKRESSNVQRGELRVRVDGKSTDQKPNTPRSKHSATEQRRRSKINDRFQMLRELIPHSDQKRDKASFLLEVIEYIHFLQEKVHKYEGSFQGWNNEPEKQMPWRNNDRPAESFQPRGANGGSNPSPTLLFASKVDEKNITISPTAHGGIHNVESSLSTTTALKTIDHPSGITNKAFPSPISSQPNFLTSTQIGGLGGAVSQLRRRLASDAENTNYQPSVESQTMTSTSEKLKEKELTIEGGAISISSVYSQGLLDTLTQALQSSGVDLSQASISVQIELGKQASLRPNIPMPMCVSKDDEDPSKNQRKMRSGSRVTGSEKSDQALKKLKMCRS 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01177 570 MobiDBLite consensus disorder prediction 524 570 - -
Mepo1g01177 570 Gene3D - 263 338 IPR036638 GO:0046983
Mepo1g01177 570 Pfam Helix-loop-helix DNA-binding domain 268 317 IPR011598 GO:0046983
Mepo1g01177 570 PANTHER BES1-INTERACTING MYC-LIKE PROTEIN 15 567 IPR044295 GO:0003700|GO:0006351|GO:0046983
Mepo1g01177 570 MobiDBLite consensus disorder prediction 332 361 - -
Mepo1g01177 570 MobiDBLite consensus disorder prediction 249 282 - -
Mepo1g01177 570 MobiDBLite consensus disorder prediction 128 171 - -
Mepo1g01177 570 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 264 333 IPR036638 GO:0046983
Mepo1g01177 570 CDD bHLH_AtBIM_like 265 341 - -
Mepo1g01177 570 FunFam BHLH domain class transcription factor 264 336 - -
Mepo1g01177 570 SMART finulus 272 322 IPR011598 GO:0046983
Mepo1g01177 570 MobiDBLite consensus disorder prediction 128 149 - -
Mepo1g01177 570 MobiDBLite consensus disorder prediction 187 213 - -
Mepo1g01177 570 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 266 316 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01177 Mepo-Chr1 11490807 11499567 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01177 1 521 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G08130 48.699 5.42e-128 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mepo1g01177 HLH 5e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01177 - - gmx:100808016 799.275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g01177 1 11490807 11499567 Mepo1g01177 1 11490807 11499567 ECH