Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01162 ATGGCACAAGACACTGTGATTGTATCTTCTGGTGCTGAATCACCTCAACGTCGTCAAGGTTTACTTCGAGATCAAGTTCAAATAGTTAAAAGAAAAGATGGTTCTGATCGCTATGAGATTGTTCCAATTCAAGATTCTTTATCATTTGAGAAAGGATTCTTCATTGTTATTCGTGCATGTCAGTTGTTGGCTCAAAACAATGATGGAATTATTTTGGTAGGAGTTGCTGGTCCTTCTGGAGCTGGCAAAACTGTTTTTACTGATAAGGTTTTCAGTTTTATGCCGAGTATTGCTGTTATTACTATGGATAATTATAATGATTCTAGTCGAATCATTGATGGAAACTTTGATGACCCTCGATTGACGGATTATGATACCTTGCTAAAAAATATACAGGATCTTAAATCAGGGAAGCCTGCTCAGGTTCCAATATATGATTTCAAGTCCAGTTCTCGCATCGGTTACAGGACTATTGAAGTCCCTAGCTCCCGTATCGTAATCATTGAAGGCATCTATGCCTTAAGTGAAAAATTACGACCATTGCTTGATCTTCGTGTTTCTGTCACTGGTGGAGTTCATTTTGACCTTGTCAAGCGTGTTTTGCGGGACATTCAACGAGCTGGTCAAGAGCCTGAAGAAATAATTCATCAAATCTCTGAAACGGTATACCCCATGTACAAAGCTTTTATAGAGCCAGATCTCCAAACAGCGCATATAAAAATTATTAACAAGTTTAATCCATTCACTGGATTCCAGAATCCCACCTACATACTGAAGTCGGCAAAGGTTGTGACGGTGGATCAAATCAAGGCAGTTATTGCTGCAGAGCATACTGAAACAAAAGAGGAAACATATGACATATATCTTCTTCCCCCTGGAGAAGACCCTGAAGCATGTCAATCATATTTGAGAATGAGAAACCGGGATGGAAAGTACAATCTTATGTTTGAGGTTAGGTCATTGAAAACACACTTGTCTGAGTTGGTGATATGA 993 0.3897 MAQDTVIVSSGAESPQRRQGLLRDQVQIVKRKDGSDRYEIVPIQDSLSFEKGFFIVIRACQLLAQNNDGIILVGVAGPSGAGKTVFTDKVFSFMPSIAVITMDNYNDSSRIIDGNFDDPRLTDYDTLLKNIQDLKSGKPAQVPIYDFKSSSRIGYRTIEVPSSRIVIIEGIYALSEKLRPLLDLRVSVTGGVHFDLVKRVLRDIQRAGQEPEEIIHQISETVYPMYKAFIEPDLQTAHIKIINKFNPFTGFQNPTYILKSAKVVTVDQIKAVIAAEHTETKEETYDIYLLPPGEDPEACQSYLRMRNRDGKYNLMFEVRSLKTHLSELVI 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01162 330 CDD UMPK_like 72 244 - -
Mepo1g01162 330 PRINTS Uridine kinase signature 193 203 - -
Mepo1g01162 330 PRINTS Uridine kinase signature 70 87 - -
Mepo1g01162 330 PRINTS Uridine kinase signature 137 152 - -
Mepo1g01162 330 PRINTS Uridine kinase signature 229 242 - -
Mepo1g01162 330 Gene3D - 71 252 IPR027417 -
Mepo1g01162 330 PANTHER URIDINE KINASE 20 269 - -
Mepo1g01162 330 Pfam CYTH domain 277 319 IPR023577 -
Mepo1g01162 330 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 67 241 IPR027417 -
Mepo1g01162 330 Pfam Phosphoribulokinase / Uridine kinase family 73 241 IPR006083 GO:0005524|GO:0016301
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01162 Mepo-Chr1 11371217 11374248 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01162 72 241 PRT Gene Family AT5G40870 28.492 2.12e-19 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01162 K00876 - gmx:100803122 565.459