Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01159 ATGGGAAGCGACAGCGAAGGTGAGAAATCGGTGCAGAGGGAGAAGGAGAGGAAGAAGATGCAGGCTCTAGCCCCCATTGCAAAACCTCTTGCTGGGAAGAAGCTTTCCAAGAAAACACTCAAGCTTGTTAAAAGAGCTGCTGAAAACAAGTGCATAAAGAGAGGAGTTAAGGAGGTGGTTAAAAGTATAAGGCGAGGTCAAAAAGGAGTGTGTATTATAGCTGGGAACATATCGCCTATTGATGTCATCACTCATGTTCCGATTTTATGCGAGGATAAGGACATTCCATATGTATATGTCTCATCTAAAGAAGACCTTGCAACTGCTGGAGCAACAAAGAGGCCTACTTGTTGTGTTTTAGTGATGACCAAGCCTTCAAAGGGGGAACTATCTCAAGAGGTACAAGAGAAATTAAAGTCAGAGTATGATCAAGTTGCATCAGAGTGTAGAGAGCTTCAGTCTACACTTTTTTGA 474 0.4283 MGSDSEGEKSVQREKERKKMQALAPIAKPLAGKKLSKKTLKLVKRAAENKCIKRGVKEVVKSIRRGQKGVCIIAGNISPIDVITHVPILCEDKDIPYVYVSSKEDLATAGATKRPTCCVLVMTKPSKGELSQEVQEKLKSEYDQVASECRELQSTLF 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01159 157 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 18 147 - -
Mepo1g01159 157 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 39 123 IPR004038 -
Mepo1g01159 157 SUPERFAMILY L30e-like 19 140 IPR029064 -
Mepo1g01159 157 Coils Coil 135 155 - -
Mepo1g01159 157 FunFam H/ACA ribonucleoprotein complex subunit NHP2 20 152 - -
Mepo1g01159 157 PRINTS Ribosomal protein L7A/RS6 family signature 52 66 IPR018492 -
Mepo1g01159 157 PRINTS Ribosomal protein L7A/RS6 family signature 71 84 IPR018492 -
Mepo1g01159 157 PRINTS Ribosomal protein L7A/RS6 family signature 97 111 IPR018492 -
Mepo1g01159 157 PRINTS Ribosomal protein L7A/RS6 family signature 87 97 IPR018492 -
Mepo1g01159 157 MobiDBLite consensus disorder prediction 1 22 - -
Mepo1g01159 157 MobiDBLite consensus disorder prediction 1 23 - -
Mepo1g01159 157 PRINTS High mobility group-like nuclear protein signature 38 53 IPR002415 GO:0003723|GO:0005730
Mepo1g01159 157 PRINTS High mobility group-like nuclear protein signature 25 38 IPR002415 GO:0003723|GO:0005730
Mepo1g01159 157 PRINTS High mobility group-like nuclear protein signature 99 111 IPR002415 GO:0003723|GO:0005730
Mepo1g01159 157 PRINTS High mobility group-like nuclear protein signature 55 65 IPR002415 GO:0003723|GO:0005730
Mepo1g01159 157 Gene3D - 17 145 IPR029064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01159 Mepo-Chr1 11365224 11367330 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01159 52 151 Cytoplasmic Ribosomal Protein Gene Family AT2G47610 25.743 1.23e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01159 K11129 - csav:115711482 258.07