Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01146 ATGGCAGAAGTTGCTCAACAGTTTGAGCCCATGGCCGATGCCGGAGCCTTCAAAACTTTCACTCAGCAGGCTGGTACTATCCGCAAAAACGGTTATGTCCTTATCAAGGGACGCCCCTGCAAGGTTGTTGAAGTTCAGACTTCAAAGACCGGGAAGCATGGCCATGCTAAATGTCATTTTGTTGGGATTGATATGGTCACTGCTGAGAAACTTGAAGATATCGTACCTTTTTCCCACAACTGTGATGTTCCGCGAGTGGTTGAGGATGGATTTGTGGTTTGA 282 0.4716 MAEVAQQFEPMADAGAFKTFTQQAGTIRKNGYVLIKGRPCKVVEVQTSKTGKHGHAKCHFVGIDMVTAEKLEDIVPFSHNCDVPRVVEDGFVV 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01146 93 ProSitePatterns Eukaryotic initiation factor 5A hypusine signature. 50 57 IPR019769 GO:0003723|GO:0003746|GO:0043022|GO:0045901|GO:0045905
Mepo1g01146 93 NCBIfam translation initiation factor IF-5A 22 86 IPR001884 GO:0003723|GO:0003746|GO:0043022|GO:0045901
Mepo1g01146 93 FunFam Eukaryotic translation initiation factor 5A 1 85 - -
Mepo1g01146 93 SUPERFAMILY Translation proteins SH3-like domain 15 86 IPR008991 -
Mepo1g01146 93 Gene3D - 2 85 IPR014722 -
Mepo1g01146 93 PANTHER TRANSLATION INITIATION FACTOR 5A FAMILY MEMBER 1 88 IPR001884 GO:0003723|GO:0003746|GO:0043022|GO:0045901
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01146 Mepo-Chr1 11230351 11231377 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01146 1 92 Eukaryotic Initiation Factors Gene Family AT1G13950 65.686 2.60e-43 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01146 K03263 K02180 pda:103704441 147.902