Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01143 ATGTCTTCTTCACCCTCTGCGCCTCCTCCTTCATCGTCTTCGTCTTCGTCTTCGTCTTCACGCTTCTCAGTTCTTCTTCATTTCAATCGGTTAAATGGATCCCATGGATATCGTTGGCAAATCGAAGGAAGATGCTTCGCTTCCGAAAGAGAGGACAAAAGGACTATTGCGCCTGAGCATGTATTGAAGGCTCTACAGGTGCTTGGATTTGGTGAGTACATCGAAGATGTTTATGCAGCATACGAACAACACAAGCTGGAGACCATGCAAGATACTTTAAAAGCTGGTAAATGGAGCAATGGAGCTGAGATGACTGAGGAACAAGCATTAGCAGAACAACAAAGGATGTTTGCAGAGGCCCGCGCAAGGATGAATGGTGGGGCCATTGCTCCAAAACAGCCAGATGGTGACCAAAATTAG 420 0.4643 MSSSPSAPPPSSSSSSSSSSRFSVLLHFNRLNGSHGYRWQIEGRCFASEREDKRTIAPEHVLKALQVLGFGEYIEDVYAAYEQHKLETMQDTLKAGKWSNGAEMTEEQALAEQQRMFAEARARMNGGAIAPKQPDGDQN 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01143 139 SUPERFAMILY Histone-fold 49 128 IPR009072 GO:0046982
Mepo1g01143 139 Gene3D Histone, subunit A 45 128 IPR009072 GO:0046982
Mepo1g01143 139 PANTHER PROTEIN DR1 HOMOLOG 49 138 IPR044255 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01143 Mepo-Chr1 11196928 11200689 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01143 50 138 CCAAT-DR1 Transcription Factor Family AT5G23090 76.923 3.90e-46 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01143 K21751 - cave:132184905 166.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g01143 1 11196928 11200689 Mepo1g01143 1 11196928 11200689 ECH