Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mepo1g01140 | ATGGCAGAACCAGAAATCAATCTCCAAGCTTCTTCACCAATGAACGAAGCGAATAACAAGATCAAAAGCAAGAAGAAGAAGAAGCACTATAAGAAGCGAACCCGTGATATCGCTGAAGAAGAGGAACACGCTGAAGAATATTTGAATGATACTCATAGCAACGAAGAATCCTCAAAAAAGAAGAAGAAGAAAAACAAAGAGGAAGAAGATGTTGTTCAAGTCGAAGATGAATTGGAAGAGAAAAAAGTGAAGAATAACAAAGGTTCTGGAATTACGAGTTCTGAATCATTTTCTTCTCTTGAGTTATCTGAAAATACTTCTAAAGCTATTATGGATATGGGATTTCAACACTTAACTCAGATTCAAGCAAGAGCGATTCCACCGCTTTTGAGTGGGAAAGATGTTCTTGGTGCTGCAAGGACAGGTTCTGGAAAAACTCTTGCCTTTTTAATTCCTGCTGTGGAGCTTTTGCACAAGCTTAAGTTTAATCAGCGAAGTGGAACTGGTGTTGTTGTCATATGCCCTACTAGAGAGCTTGCCATTCAGACACACGAGGTTGCTCAGAAGCTTCTAAAGCATCATCGTCATTCACAAACTCTTGGATTGGTTATTGGAGGTTCAGCTAGAAGAACTGAAGCTGAAAACCTTGCTAAAGGGATAAATATAGTGGTAGCTACTCCTGGTCGTCTTTTGGATCATCTACAAAATACCAAGAGATTCATATATAATAACCTTAAGTGCCTCATTATCGATGAAGCCGACAGGATATTGGAAGCAAACTTTGAGGATGAATTGAAGCAGATTATCAAGCTCCTCCCAAAGAACAGACAGACAGCTTTATTTTCAGCTACACAAACAAAGAAGGTCGAAGATCTTGCTCGCCTGTCATTTCAGATGACTCCTATCTATATTGATGTAGACGATGGGAGAAAGAAGGTTACAAATGAAGGGTTGCTTCAGGGTTATGTTGTTGTTCCCTGTGCCAAGCGTTTTATGGTTCTCTATTCCTTCTTGAAGAGGCATCAATCGAAAAAAGTGATGGTCTTTTTCTCTTCATGCAACAGTGTCAAATTCCATGCAGACATTTTTAATCACATTCATTTGCATTGTTCAAGTATTTACGGAAAACAAAAGCAACAGACCCGGACAACTACTTTCGTTGACTTCTGCCAAGCAGAAAAGGGGATCTTGCTCTGTACTGACGTTGCTGCTCGTGGACTGGACATACCTTCTGTGGACTGGATTTTGCAGTACGATCCACCTGATGAACCAAAGGAATATATCCACAGGGTCGGTAGAACAGCTCGTGGGGAAGATGGAAAAGGCAATGCTTTACTTTTCCTGATTCCTGAAGAATTGCAATTTCTTCGCTATCTGAAGGAAGCTAAGGTCCCTGTGAAAGAATACGCTTATGATGAAAAGAAGGTGGCAAACATACAGTCTCACCTGGAGAATTTGGTTGCTGAAAATTATTTTTTGAATAAAATGGCTAAAGAAGCTTATAGATCATACATATTAGCGTACAATTCACATTCTTCGAAGGATATATTCAGTGTTCAACGCCTTGATATGCAGGCTGTTGCTGCTTCATTCTGTTTTTCGAACCCTCCAAATGTTAGTATAAACATAAACGTCAGCAAACAAAGGAAGAAAACTCGTAGAGTTGATGGAAGTAGACACGGGTTCAATCCTAACAATCCTTATGGAAAGCGAAATGCCGATGATACGCGGCAATTTGTGAGGCATTAA | 1749 | 0.3985 | MAEPEINLQASSPMNEANNKIKSKKKKKHYKKRTRDIAEEEEHAEEYLNDTHSNEESSKKKKKKNKEEEDVVQVEDELEEKKVKNNKGSGITSSESFSSLELSENTSKAIMDMGFQHLTQIQARAIPPLLSGKDVLGAARTGSGKTLAFLIPAVELLHKLKFNQRSGTGVVVICPTRELAIQTHEVAQKLLKHHRHSQTLGLVIGGSARRTEAENLAKGINIVVATPGRLLDHLQNTKRFIYNNLKCLIIDEADRILEANFEDELKQIIKLLPKNRQTALFSATQTKKVEDLARLSFQMTPIYIDVDDGRKKVTNEGLLQGYVVVPCAKRFMVLYSFLKRHQSKKVMVFFSSCNSVKFHADIFNHIHLHCSSIYGKQKQQTRTTTFVDFCQAEKGILLCTDVAARGLDIPSVDWILQYDPPDEPKEYIHRVGRTARGEDGKGNALLFLIPEELQFLRYLKEAKVPVKEYAYDEKKVANIQSHLENLVAENYFLNKMAKEAYRSYILAYNSHSSKDIFSVQRLDMQAVAASFCFSNPPNVSININVSKQRKKTRRVDGSRHGFNPNNPYGKRNADDTRQFVRH | 582 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mepo1g01140 | 582 | ProSitePatterns | DEAD-box subfamily ATP-dependent helicases signature. | 249 | 257 | IPR000629 | - | |
Mepo1g01140 | 582 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 89 | 305 | IPR027417 | - | |
Mepo1g01140 | 582 | MobiDBLite | consensus disorder prediction | 33 | 86 | - | - | |
Mepo1g01140 | 582 | FunFam | RNA helicase | 314 | 544 | - | - | |
Mepo1g01140 | 582 | Gene3D | - | 40 | 307 | IPR027417 | - | |
Mepo1g01140 | 582 | MobiDBLite | consensus disorder prediction | 1 | 98 | - | - | |
Mepo1g01140 | 582 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 243 | 452 | IPR027417 | - | |
Mepo1g01140 | 582 | ProSiteProfiles | DEAD-box RNA helicase Q motif profile. | 95 | 123 | IPR014014 | GO:0003724 | |
Mepo1g01140 | 582 | CDD | SF2_C_DEAD | 318 | 448 | - | - | |
Mepo1g01140 | 582 | PANTHER | RNA HELICASE | 55 | 486 | - | - | |
Mepo1g01140 | 582 | CDD | DEADc_DDX18 | 106 | 305 | IPR044773 | GO:0003724|GO:0005524 | |
Mepo1g01140 | 582 | SMART | ultradead3 | 114 | 321 | IPR014001 | - | |
Mepo1g01140 | 582 | SMART | DUF4217_3 | 478 | 541 | IPR025313 | - | |
Mepo1g01140 | 582 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 330 | 487 | IPR001650 | - | |
Mepo1g01140 | 582 | Pfam | Domain of unknown function (DUF4217) | 479 | 539 | IPR025313 | - | |
Mepo1g01140 | 582 | Pfam | DEAD/DEAH box helicase | 119 | 292 | IPR011545 | GO:0003676|GO:0005524 | |
Mepo1g01140 | 582 | Coils | Coil | 57 | 84 | - | - | |
Mepo1g01140 | 582 | MobiDBLite | consensus disorder prediction | 547 | 582 | - | - | |
Mepo1g01140 | 582 | Gene3D | - | 318 | 556 | IPR027417 | - | |
Mepo1g01140 | 582 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 126 | 303 | IPR014001 | - | |
Mepo1g01140 | 582 | Pfam | Helicase conserved C-terminal domain | 333 | 437 | IPR001650 | - | |
Mepo1g01140 | 582 | SMART | helicmild6 | 357 | 438 | IPR001650 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mepo1g01140 | Mepo-Chr1 | 11170496 | 11177779 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mepo1g01140 | 95 | 436 | Eukaryotic Initiation Factors Gene Family | AT3G13920 | 32.286 | 1.90e-46 | 167 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mepo1g01140 | K13179 | - | gmx:100798885 | 867.07 |