Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01140 ATGGCAGAACCAGAAATCAATCTCCAAGCTTCTTCACCAATGAACGAAGCGAATAACAAGATCAAAAGCAAGAAGAAGAAGAAGCACTATAAGAAGCGAACCCGTGATATCGCTGAAGAAGAGGAACACGCTGAAGAATATTTGAATGATACTCATAGCAACGAAGAATCCTCAAAAAAGAAGAAGAAGAAAAACAAAGAGGAAGAAGATGTTGTTCAAGTCGAAGATGAATTGGAAGAGAAAAAAGTGAAGAATAACAAAGGTTCTGGAATTACGAGTTCTGAATCATTTTCTTCTCTTGAGTTATCTGAAAATACTTCTAAAGCTATTATGGATATGGGATTTCAACACTTAACTCAGATTCAAGCAAGAGCGATTCCACCGCTTTTGAGTGGGAAAGATGTTCTTGGTGCTGCAAGGACAGGTTCTGGAAAAACTCTTGCCTTTTTAATTCCTGCTGTGGAGCTTTTGCACAAGCTTAAGTTTAATCAGCGAAGTGGAACTGGTGTTGTTGTCATATGCCCTACTAGAGAGCTTGCCATTCAGACACACGAGGTTGCTCAGAAGCTTCTAAAGCATCATCGTCATTCACAAACTCTTGGATTGGTTATTGGAGGTTCAGCTAGAAGAACTGAAGCTGAAAACCTTGCTAAAGGGATAAATATAGTGGTAGCTACTCCTGGTCGTCTTTTGGATCATCTACAAAATACCAAGAGATTCATATATAATAACCTTAAGTGCCTCATTATCGATGAAGCCGACAGGATATTGGAAGCAAACTTTGAGGATGAATTGAAGCAGATTATCAAGCTCCTCCCAAAGAACAGACAGACAGCTTTATTTTCAGCTACACAAACAAAGAAGGTCGAAGATCTTGCTCGCCTGTCATTTCAGATGACTCCTATCTATATTGATGTAGACGATGGGAGAAAGAAGGTTACAAATGAAGGGTTGCTTCAGGGTTATGTTGTTGTTCCCTGTGCCAAGCGTTTTATGGTTCTCTATTCCTTCTTGAAGAGGCATCAATCGAAAAAAGTGATGGTCTTTTTCTCTTCATGCAACAGTGTCAAATTCCATGCAGACATTTTTAATCACATTCATTTGCATTGTTCAAGTATTTACGGAAAACAAAAGCAACAGACCCGGACAACTACTTTCGTTGACTTCTGCCAAGCAGAAAAGGGGATCTTGCTCTGTACTGACGTTGCTGCTCGTGGACTGGACATACCTTCTGTGGACTGGATTTTGCAGTACGATCCACCTGATGAACCAAAGGAATATATCCACAGGGTCGGTAGAACAGCTCGTGGGGAAGATGGAAAAGGCAATGCTTTACTTTTCCTGATTCCTGAAGAATTGCAATTTCTTCGCTATCTGAAGGAAGCTAAGGTCCCTGTGAAAGAATACGCTTATGATGAAAAGAAGGTGGCAAACATACAGTCTCACCTGGAGAATTTGGTTGCTGAAAATTATTTTTTGAATAAAATGGCTAAAGAAGCTTATAGATCATACATATTAGCGTACAATTCACATTCTTCGAAGGATATATTCAGTGTTCAACGCCTTGATATGCAGGCTGTTGCTGCTTCATTCTGTTTTTCGAACCCTCCAAATGTTAGTATAAACATAAACGTCAGCAAACAAAGGAAGAAAACTCGTAGAGTTGATGGAAGTAGACACGGGTTCAATCCTAACAATCCTTATGGAAAGCGAAATGCCGATGATACGCGGCAATTTGTGAGGCATTAA 1749 0.3985 MAEPEINLQASSPMNEANNKIKSKKKKKHYKKRTRDIAEEEEHAEEYLNDTHSNEESSKKKKKKNKEEEDVVQVEDELEEKKVKNNKGSGITSSESFSSLELSENTSKAIMDMGFQHLTQIQARAIPPLLSGKDVLGAARTGSGKTLAFLIPAVELLHKLKFNQRSGTGVVVICPTRELAIQTHEVAQKLLKHHRHSQTLGLVIGGSARRTEAENLAKGINIVVATPGRLLDHLQNTKRFIYNNLKCLIIDEADRILEANFEDELKQIIKLLPKNRQTALFSATQTKKVEDLARLSFQMTPIYIDVDDGRKKVTNEGLLQGYVVVPCAKRFMVLYSFLKRHQSKKVMVFFSSCNSVKFHADIFNHIHLHCSSIYGKQKQQTRTTTFVDFCQAEKGILLCTDVAARGLDIPSVDWILQYDPPDEPKEYIHRVGRTARGEDGKGNALLFLIPEELQFLRYLKEAKVPVKEYAYDEKKVANIQSHLENLVAENYFLNKMAKEAYRSYILAYNSHSSKDIFSVQRLDMQAVAASFCFSNPPNVSININVSKQRKKTRRVDGSRHGFNPNNPYGKRNADDTRQFVRH 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01140 582 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 249 257 IPR000629 -
Mepo1g01140 582 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 89 305 IPR027417 -
Mepo1g01140 582 MobiDBLite consensus disorder prediction 33 86 - -
Mepo1g01140 582 FunFam RNA helicase 314 544 - -
Mepo1g01140 582 Gene3D - 40 307 IPR027417 -
Mepo1g01140 582 MobiDBLite consensus disorder prediction 1 98 - -
Mepo1g01140 582 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 243 452 IPR027417 -
Mepo1g01140 582 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 95 123 IPR014014 GO:0003724
Mepo1g01140 582 CDD SF2_C_DEAD 318 448 - -
Mepo1g01140 582 PANTHER RNA HELICASE 55 486 - -
Mepo1g01140 582 CDD DEADc_DDX18 106 305 IPR044773 GO:0003724|GO:0005524
Mepo1g01140 582 SMART ultradead3 114 321 IPR014001 -
Mepo1g01140 582 SMART DUF4217_3 478 541 IPR025313 -
Mepo1g01140 582 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 330 487 IPR001650 -
Mepo1g01140 582 Pfam Domain of unknown function (DUF4217) 479 539 IPR025313 -
Mepo1g01140 582 Pfam DEAD/DEAH box helicase 119 292 IPR011545 GO:0003676|GO:0005524
Mepo1g01140 582 Coils Coil 57 84 - -
Mepo1g01140 582 MobiDBLite consensus disorder prediction 547 582 - -
Mepo1g01140 582 Gene3D - 318 556 IPR027417 -
Mepo1g01140 582 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 126 303 IPR014001 -
Mepo1g01140 582 Pfam Helicase conserved C-terminal domain 333 437 IPR001650 -
Mepo1g01140 582 SMART helicmild6 357 438 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01140 Mepo-Chr1 11170496 11177779 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01140 95 436 Eukaryotic Initiation Factors Gene Family AT3G13920 32.286 1.90e-46 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01140 K13179 - gmx:100798885 867.07