Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01119 ATGTATTCATCAAATAGTTCCCTCAATGGAAATAACCTAGCATTTTCCTCTAAATCACCTTTTTGTTCCTTTGAAAGCAACTCAACTTCATCAAAAGATATTGAAAACAGTCATTCCCCCTTTCCTCTTCCTCCTTTCTCTTTCTTTCAATTCCCTAATTATCCTGATGATATTGATCCCTTTCAAGACAGCCACCAAATCTTCCTCCAACAACATGATGTTGATTTCCAACTTCATCATCCACCTGTTGTGATGAATAACAACAGTACTGATCATCATCAGCGGCCTTCCAATTCAACAATCAAAGCTAACAACAATCTTCTTCCTGCAGCTACTGGTAAAGGCAAAACTGTAGTGGATCAGCAGATCCAAAGAAAAAGATCTAGCAAGAGAGACCGACACAGCAAGATCAAAACGGCGAAAGGACTAAGGGATCGGAGAATGAGACTGTCACTTGAAGTTGCAAAGAGGTTTTTTGGTCTTCAAGATATGTTAGGCTTTGAAAAGGCAAGCAAAACAGTGGACTGGTTGCTCAACCAATCCAAACTTGAGATCAAACACCTTGCAAGAGAGAAAAATGTTAATTATCCTACTAAGAGTGCATCTTCAACTTCTGAATGTACTGAAGGAGTTTCAAGCTTGGATAATGAAGTTGGAAATCAAGAAGAACCACAACAACAAAAACATGTTATGAAGAGAAGAAATAGTACTAATAAGGTTTGTAGAAAGAGTGCATTCAATTCTATAGGTAGAGAAAAAGCAAGAGAAAGGGCAAGAGAAAGGACAAGAGAAAAAAGGAAGGCTAGAACATCACTAGTTGATGAATCGAATTCAAAGCAATACAATGAAGAAGGAACAAAAACTAACCTCATTTGGAACCCCTTTGAAAGTGTGGAAGAATCTGCAGGTACACATCAGAGTACTCAAGGTGTGAATCATCCTTCCTTTGATCATGTGAAGCTGATTGATGAGGCTGAAGTAGAAACAAGCTCTCAAAAAGCAAAGGAACAACATTCAGATGAAGATAATTCTTTGTTCATTATGAGCAAATGGAGTCCACCTATGATGTTCAATTCTCTCAACAACCTCCAACAAGTAAGTTCAAATTAG 1110 0.3784 MYSSNSSLNGNNLAFSSKSPFCSFESNSTSSKDIENSHSPFPLPPFSFFQFPNYPDDIDPFQDSHQIFLQQHDVDFQLHHPPVVMNNNSTDHHQRPSNSTIKANNNLLPAATGKGKTVVDQQIQRKRSSKRDRHSKIKTAKGLRDRRMRLSLEVAKRFFGLQDMLGFEKASKTVDWLLNQSKLEIKHLAREKNVNYPTKSASSTSECTEGVSSLDNEVGNQEEPQQQKHVMKRRNSTNKVCRKSAFNSIGREKARERARERTREKRKARTSLVDESNSKQYNEEGTKTNLIWNPFESVEESAGTHQSTQGVNHPSFDHVKLIDEAEVETSSQKAKEQHSDEDNSLFIMSKWSPPMMFNSLNNLQQVSSN 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01119 369 ProSiteProfiles R domain profile. 248 265 IPR017888 -
Mepo1g01119 369 MobiDBLite consensus disorder prediction 325 345 - -
Mepo1g01119 369 Pfam TCP family transcription factor 129 267 IPR017887 -
Mepo1g01119 369 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 102 323 IPR005333 GO:0003700
Mepo1g01119 369 MobiDBLite consensus disorder prediction 325 343 - -
Mepo1g01119 369 MobiDBLite consensus disorder prediction 196 225 - -
Mepo1g01119 369 MobiDBLite consensus disorder prediction 246 273 - -
Mepo1g01119 369 ProSiteProfiles TCP domain profile. 130 188 IPR017887 -
Mepo1g01119 369 MobiDBLite consensus disorder prediction 196 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01119 Mepo-Chr1 10905282 10906778 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01119 1 270 TCP Transcription Factor Family AT3G18550 31.250 1.09e-25 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Mepo1g01119 TCP 2.4e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01119 - - tpra:123923172 463.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g01119 1 10905282 10906778 Mepo1g01119 1 10905282 10906778 ECH