Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01106 ATGAACCTCATTACAAACCCATTGAGAACAAAGAAAGGAACGCTTAAGAAGATTCCAAAAACATCAAACAAGGGTCATCAGAAAAAGTATCTAGGAGTGAGACAAAGGCCTTCAGGAAGATGGATAGCTGAGATCAAAGACTCATCCCAAAAACTAAGACTATGGTTAGGTACTTTTGACAGATCAGAAGATGCTGCCCTGTCTTATGATTCTGCTGCAAGGCTTCTTAGAGGAAAAAATGCCAAAACCAACTTTCCAAAAACTCATGAACAAGATTTCAGCATTTTAGGGAAGAATCCTAGAGCTTTTCAGCTTCTTAAGCATGCAATGATGAAGAACCATGCAGTTTCTTCATCATCATCTGTTTATTCCACTGTCATGATGACATGGAAAAATGATCAACTTGACGCGATTGTTGAGGAAACGATTGTTTGTTCTGTTCCTGATGTTGAAGGTTCTACTGCAGAGTGTAGTGGAATTTCATTTGGAAGTTCTAAGGTTTATTCTTCTGTAGTTGTTGCTCCTTCTTTCGGTGCTTCTTAA 543 0.3849 MNLITNPLRTKKGTLKKIPKTSNKGHQKKYLGVRQRPSGRWIAEIKDSSQKLRLWLGTFDRSEDAALSYDSAARLLRGKNAKTNFPKTHEQDFSILGKNPRAFQLLKHAMMKNHAVSSSSSVYSTVMMTWKNDQLDAIVEETIVCSVPDVEGSTAECSGISFGSSKVYSSVVVAPSFGAS 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01106 180 CDD AP2 28 86 IPR001471 GO:0003700|GO:0006355
Mepo1g01106 180 SUPERFAMILY DNA-binding domain 29 87 IPR016177 GO:0003677
Mepo1g01106 180 Gene3D AP2/ERF domain 28 88 IPR036955 GO:0003700|GO:0006355
Mepo1g01106 180 SMART rav1_2 29 92 IPR001471 GO:0003700|GO:0006355
Mepo1g01106 180 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 25 122 - -
Mepo1g01106 180 PRINTS Ethylene responsive element binding protein signature 68 88 IPR001471 GO:0003700|GO:0006355
Mepo1g01106 180 PRINTS Ethylene responsive element binding protein signature 30 41 IPR001471 GO:0003700|GO:0006355
Mepo1g01106 180 FunFam ethylene-responsive transcription factor RAP2-11 28 87 - -
Mepo1g01106 180 ProSiteProfiles AP2/ERF domain profile. 29 86 IPR001471 GO:0003700|GO:0006355
Mepo1g01106 180 Pfam AP2 domain 29 78 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01106 Mepo-Chr1 10736553 10737252 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01106 14 85 AP2-EREBP Transcription Factor Family AT5G19790 59.722 2.20e-26 99.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mepo1g01106 AP2 1.1e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01106 - K09286 gmx:100807374 231.876