Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01104 ATGTCTCAATCCAAATGCGATGAACCTGATAAAGCGTATGAAATCGCTGAACTCATCGCCATTTTTGTTACCTTGTCTTTGTTCCTTTTTCTTCGTACACAGTTTCTCTCGCATTGGTTAGATGCTTTTATCTACGATTACCTCGTGAAGAATCAATTGTATGAAACTGCAAGAGTGTTTCATGATGAAGGCAATGTTGAACAGAATATTGTTATGGATGCATCTGGTGGTTCACTCTTCGAGTGGTGGTCTGTTTTCTGGGAATTGTTTATGGCCAAACAAGGTTTTTCACACTCAGAACCAGCATTATCTTACCTTAAGGCTCAAGAAATGCGGAAGCAAGAAGAAGAGATAGAGAAAATCCAGTTCATATTACAGAGCCCTGCTCAGCTGCAGCAATATGGGGCTGAAACTCAAGAAGGTGTTAATGGCAATGTTCTCTGTCCCATAAACAATGCTCCTATGGTGAGGCAGAACCGGGTTACTTCTAATACAATGGCAACAAAACTAAATGAGGACAGGTTGAAGTCTCCCCTTCAGGGAAATGCTTTTGATGACAGGACCTTTAAGATAATGAATGCTTATACCCGCGGTCAGCTTCCAAACGAGGATTGTGCCTTGTTGTTGAACGAAATAGCACCAATAACTGGTGGACAGCCTTCAGGACAAACATTGGCCAATGCACTTAGCATTTTACAAGAGAAACTTCAACAGGATCAAAATCAGAACCAGCAACTTCCAGGGTTTACACAAGCCATGCACAGTGGTATGATTGCAATGATGAGGTCTCGAGCTGTTGTTTCAGAAGGATCCATTTACAGTGTTCATGGTTCAAATCAAGGTGGTAGCGACTTGACTCTGAAAGGGTGGCCTTTAGCAGGACTGGATGAGCATCATGCGGAACTTCTTCATAAGCATAATTTGATTCTGCCTTCACAATCTTCCAATCAATTTTCACCACGGCAGCAACTTATGTTTCAGGCACAGCAGGATTTAGTTAATCCATTTGTCAGTGGTTTTGATGGCAAAAGACCAAGTGTGCTTGTAAATAATCAAAATATGGTTCCTTGGAACGATGGCCAATCAAATTCTGTAGGTGGTTCCGTTCCCAATATTGTAACACCTGCACAAATTGGATTCCCTGAATTGCCTCATCTGGACTTAGATATGACCCATAAGGCTTCCAAAAGTCAAGTCGAACGGAAGCAAAAACGAAAAGTAGGATCATGTTCAGGTCTTGCCAATAGCTCTGGAACTGCAAACACAATGGGATCATCTTCTGGTTCACCCTCTACACCAACTATGCAGACACGACTGCCAACTTGGCAACAGAATGGTTTGGGCTCACTTGCATCAACACAGAATCAATTGGCTCATATGGACCATCTCAAGAGCAACGGATTTTTGGCGGACAATTTTGAGTCACTCTCATCTCTTGCTGATGCAGACCATAATGGACGAGTTGGCCAAGGATGCTCATTTAATGAGATCAAGCATGGATTGGCTAGTTCAGATAAAGTTGACTGTTGTCACTTCTCCTCGGATGGAAAACTATTTGTTACTGGTGGTCGTGATAAAAAGGCTTCTCTATGGTGCACAAAATTGTTTAACCTGAAATCTACACTTGAAGAGCACACTCAACGGATAACTGATGTTAGATTTAGCCCAACCATGTTCTATGTTGCTACGTCCTCAGCCGATAAATCTGTAAAGGTTTGGGATGTTAATAATCCTGGTCATTCTCTTCGGACATTTACAGGGAATACAGCTGTGCTGTCACTAGACTTTCATCCAAGTAAACATGGCCTTATTTGTTCATGTGATAATAAGGAGATAAGATATTGGAATATTGCAAATGGTAGTTGTATTGGGATTTTCAAGGGTGGTGTAACTCAGGTGAGATTTCAACCTGGTTTGGGAAAGGTTCTTGCAGCCGCAGTAAATAATCTAATACTCATGTTTGACGCAGAAAGTCTGAGTTGCAGATTTAAATTGCAGGGCCATATGAGCCTTGTTCGTTCAGTGTGCTGGCACTCTTCTGGAAATTATCTGGCATCTGTTTGTAATGATCTGGTTAAACTCTGGGCCATTGGATCTGATGGCAGCGGGGCATGTATTACGCAATTGAATGCAGCTGAGAGCAAATTCAAGACCTGCGTTTTCCATCCGAGCTACGATATTTTGATCATTTGCTGCAGTGAGTCGCTTATGCTCTGGGACTTTGTGGAGAGGAAAAAACTTATTGTGCCTGCACACGACAAGCTTGTATCTGCATTGGCAGTATCAAATGTTACTGGATTGGTGGCTTCAGTTAGTCATGATAGGACTTTCAAGATCTGGAAGTGA 2346 0.4211 MSQSKCDEPDKAYEIAELIAIFVTLSLFLFLRTQFLSHWLDAFIYDYLVKNQLYETARVFHDEGNVEQNIVMDASGGSLFEWWSVFWELFMAKQGFSHSEPALSYLKAQEMRKQEEEIEKIQFILQSPAQLQQYGAETQEGVNGNVLCPINNAPMVRQNRVTSNTMATKLNEDRLKSPLQGNAFDDRTFKIMNAYTRGQLPNEDCALLLNEIAPITGGQPSGQTLANALSILQEKLQQDQNQNQQLPGFTQAMHSGMIAMMRSRAVVSEGSIYSVHGSNQGGSDLTLKGWPLAGLDEHHAELLHKHNLILPSQSSNQFSPRQQLMFQAQQDLVNPFVSGFDGKRPSVLVNNQNMVPWNDGQSNSVGGSVPNIVTPAQIGFPELPHLDLDMTHKASKSQVERKQKRKVGSCSGLANSSGTANTMGSSSGSPSTPTMQTRLPTWQQNGLGSLASTQNQLAHMDHLKSNGFLADNFESLSSLADADHNGRVGQGCSFNEIKHGLASSDKVDCCHFSSDGKLFVTGGRDKKASLWCTKLFNLKSTLEEHTQRITDVRFSPTMFYVATSSADKSVKVWDVNNPGHSLRTFTGNTAVLSLDFHPSKHGLICSCDNKEIRYWNIANGSCIGIFKGGVTQVRFQPGLGKVLAAAVNNLILMFDAESLSCRFKLQGHMSLVRSVCWHSSGNYLASVCNDLVKLWAIGSDGSGACITQLNAAESKFKTCVFHPSYDILIICCSESLMLWDFVERKKLIVPAHDKLVSALAVSNVTGLVASVSHDRTFKIWK 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01104 781 CDD WD40 504 781 - -
Mepo1g01104 781 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 542 577 - -
Mepo1g01104 781 MobiDBLite consensus disorder prediction 409 439 - -
Mepo1g01104 781 ProSiteProfiles LIS1 homology (LisH) motif profile. 40 68 IPR006594 GO:0005515
Mepo1g01104 781 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 749 781 - -
Mepo1g01104 781 PANTHER TRANSCRIPTIONAL REGULATOR OF FILAMENTOUS GROWTH FLO8 39 781 IPR044716 GO:0003714
Mepo1g01104 781 SMART WD40_4 658 696 IPR001680 GO:0005515
Mepo1g01104 781 SMART WD40_4 702 740 IPR001680 GO:0005515
Mepo1g01104 781 SMART WD40_4 535 574 IPR001680 GO:0005515
Mepo1g01104 781 SMART WD40_4 619 655 IPR001680 GO:0005515
Mepo1g01104 781 SMART WD40_4 742 781 IPR001680 GO:0005515
Mepo1g01104 781 SMART WD40_4 493 532 IPR001680 GO:0005515
Mepo1g01104 781 SMART WD40_4 578 616 IPR001680 GO:0005515
Mepo1g01104 781 Gene3D - 484 626 IPR015943 GO:0005515
Mepo1g01104 781 MobiDBLite consensus disorder prediction 393 439 - -
Mepo1g01104 781 MobiDBLite consensus disorder prediction 393 407 - -
Mepo1g01104 781 Gene3D - 627 781 IPR015943 GO:0005515
Mepo1g01104 781 Pfam WD domain, G-beta repeat 504 531 IPR001680 GO:0005515
Mepo1g01104 781 Pfam WD domain, G-beta repeat 538 574 IPR001680 GO:0005515
Mepo1g01104 781 Pfam WD domain, G-beta repeat 581 616 IPR001680 GO:0005515
Mepo1g01104 781 Pfam WD domain, G-beta repeat 661 695 IPR001680 GO:0005515
Mepo1g01104 781 ProSitePatterns Trp-Asp (WD) repeats signature. 561 575 IPR019775 -
Mepo1g01104 781 ProSiteProfiles Trp-Asp (WD) repeats profile. 749 781 IPR001680 GO:0005515
Mepo1g01104 781 Pfam LisH 40 63 IPR006594 GO:0005515
Mepo1g01104 781 ProSiteProfiles Trp-Asp (WD) repeats profile. 542 577 IPR001680 GO:0005515
Mepo1g01104 781 SUPERFAMILY WD40 repeat-like 501 781 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01104 Mepo-Chr1 10707912 10715984 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01104 501 741 Miscellaneous Gene Families AT5G08390 25.200 8.84e-16 79.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR LUG Mepo1g01104 WD40 0.0014 CL0186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01104 - - mtr:11440246 1385.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g01104 1 10707912 10715984 Mepo1g01104 1 10707912 10715984 ECH