Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01100 ATGGCATCACCATCTGAACTAGGCTTGGATTGCAAGCCACATAGCTACTCCATGTTACTGAAATCATTTGGAGAACAAAGTGATCAAAGCTACAAACTCGAAGAATTTGTTTCTCGCTTAGAAGAAGAACGTCTCAAAATCGATGCTTTCAAACGTGAACTTCCTCTCTGCATGCAACTTCTCACAAACGCGATGGAGGCATCGAAGCAGCAACTTCAAGCGTTTAGAGTGAATCAAGGAGCAAAACCAATCCTAGAAGAATTCATACCAGTGAAGCAATTATCATCATCAGAAACATTGGAAAAGACAACAAATAATAATGTATGTGATAAGGCAAATTGGATGACAAGTGCACAACTATGGAGCCAAACAAGTGAAGGAACAAAACAACAACAAAATTCCACAAAAGAAATTATTGAAAACAATAATAATATTGGATTTAACATTAGTCCGAAACATAGAAATGGTGGAGCGTTTTTACCATTCTCAAAAGAAAGAAATAACTCCTCTTGCCAAGGTCAGGGTCTTCCTGAACTAGCACTTGCATCTACTCAAAAAGAAGTTGAGGATAAGAAACATGTTGGAGAAGTAGAAAAAGGGAAAACAAATTCAGGGAATGAAGTTGATCATCAAGGAAAAGGGAGTCCAGTAGCATCATCACAAACTCAAACAACAAGCAATAATTCAAACCAAACTCATAGGAAAGCAAGAAGGTGCTGGTCACCAGACTTGCACCGTAGATTTGTTAATGCTCTTCAAATGCTTGGTGGATCTCAAGTGGCAACACCAAAACAGATAAGGGAGTTGATGAAGGTTGATGGTTTGACTAATGATGAAGTTAAAAGCCATCTGCAGAAATATAGGCTTCACACAAGAAGACCAAGTCCAAGTGCACAAAATGGTGCACCAGCAGCACAGCTAGTAGTTTTAGGAGGAATATGGGTCCCACCAGAATATGCAACTGCAGCTCATGCAGGAGGAACCCCTACTCTCTATGGTGGCCATCCTACTTCTCATCATCTCACTCTGCCACATTACTGCACTGCTCCAGGCCAAGATCAGTACTACACTACTGCACCGCCGCAGCAGCTACTTCCGCCGCCTCATCACATTCATCATGTCTACAAGACCACGCCACACGGCCAAGGTTCACCGGAGACATGTGGAGACGGGTTAGAGAGTATCGAAAATGGGAAGACGTCCGAGAGTAGTAGCTGGAAAGAGGGGAGTTCTGAGGATGAAGGGGAGAGGAAAGGGTTTGTTGAAGAGAGCAATGGGAGTGAAATCACTCTCAAATTTTAA 1302 0.4224 MASPSELGLDCKPHSYSMLLKSFGEQSDQSYKLEEFVSRLEEERLKIDAFKRELPLCMQLLTNAMEASKQQLQAFRVNQGAKPILEEFIPVKQLSSSETLEKTTNNNVCDKANWMTSAQLWSQTSEGTKQQQNSTKEIIENNNNIGFNISPKHRNGGAFLPFSKERNNSSCQGQGLPELALASTQKEVEDKKHVGEVEKGKTNSGNEVDHQGKGSPVASSQTQTTSNNSNQTHRKARRCWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRLHTRRPSPSAQNGAPAAQLVVLGGIWVPPEYATAAHAGGTPTLYGGHPTSHHLTLPHYCTAPGQDQYYTTAPPQQLLPPPHHIHHVYKTTPHGQGSPETCGDGLESIENGKTSESSSWKEGSSEDEGERKGFVEESNGSEITLKF 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01100 433 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 20 407 IPR044787 GO:0003700|GO:0006355
Mepo1g01100 433 Coils Coil 33 53 - -
Mepo1g01100 433 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 232 292 IPR017930 -
Mepo1g01100 433 MobiDBLite consensus disorder prediction 162 179 - -
Mepo1g01100 433 NCBIfam myb-like DNA-binding domain, SHAQKYF class 235 290 IPR006447 GO:0003677
Mepo1g01100 433 MobiDBLite consensus disorder prediction 144 241 - -
Mepo1g01100 433 MobiDBLite consensus disorder prediction 377 433 - -
Mepo1g01100 433 Gene3D - 234 292 - -
Mepo1g01100 433 Pfam Myb-like DNA-binding domain 237 288 IPR001005 -
Mepo1g01100 433 MobiDBLite consensus disorder prediction 406 423 - -
Mepo1g01100 433 MobiDBLite consensus disorder prediction 207 235 - -
Mepo1g01100 433 SUPERFAMILY Homeodomain-like 232 293 IPR009057 -
Mepo1g01100 433 FunFam Myb family transcription factor 234 292 - -
Mepo1g01100 433 MobiDBLite consensus disorder prediction 184 206 - -
Mepo1g01100 433 Coils Coil 58 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01100 Mepo-Chr1 10656344 10659052 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01100 1 433 G2-like Transcription Factor Family AT2G03500 51.509 3.46e-122 360
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mepo1g01100 Myb_DNA-binding 9.1e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01100 - - tpra:123921036 699.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g01100 1 10656344 10659052 Mepo1g01100 1 10656344 10659052 ECH