Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01099 ATGACACTGGACGATGATAGCTCCATTTACGTTGGTGGTCTTCCCTACGACGCCACTGATGAAACAATTCGCACTGTCTTCAATTTGTATGGTGCCATTCTTGATGTCAAGATTATCAATGACCAACGTACATTTGGGAAATGCTATTGTTTTGTTACTTTCACAAACCCTAGGTCTGCAATTGATGCTATCAACGATATGAATGGAAGAACTATTAACGGCCGCGTGGTTAAAGTTAATGGGGTGAAGTCTCGTGGCAGTGGAGGTGGTGGTGGCAGATCGAATTTTGGGAGAGAAAGGGAACGTTATTATCATCATAATGATGAAAGGAATGGAGATTGGGATCGTGGCGGCAGAGGTCGAGAGATTCGAGACCAAGATTATGATCGTGTCAGAGATAGAGAGATTCGAGACCAAGATTATGATCATGGTAATGAGAAAGATGGATACAGGAATAGAGGCAGTGATTGGACCAGAGGTGGTGATTGGACTCGACAGCATCAGAGGTCTCGAGACCGTGATAGGTCCCGCGACCGTGATAGGTCTCGAGACCTTGATAGGGATAGGGATAGGGATAGAAGAGTCGAGCATATGCAAAATTATGATGGTCAAGCTAGAGAAAGCATGTTAGTCCGTGATAGGTCACGAGACCGTGACAGGGATAGGGATAGAAGAGTTGAACACATGCTAGATTATGATGGTCAAGCTAGAGCAAGTATGTTAGGTCGTGATAGATCCCGAGACCATGATAGGGATAGGGATAGAAGAGTTGAACATATGCAAGATTATGATGGTCAAGCTAGAGAAAGCGTGTTAGACCGTGATAGGTCCCGAGACCGTGACCGTGACCGTGACAGGGGTATAAAAGTTGAGCATTTGCAAGATTATGATGATCAAGCTAGAGAAAGCATGTTAGATCGTGATGGGTCTCGAGACTGTGACAGAGATAGGAGTAGAAGAGTTGAGCATTTGCAAGGTTATGATGATCAAGCTAGAGAAAGCATGTTAGACCGCGATGGGTCCCGAGACCGTGACATCATGGTTAGGGATAGAAGAGTTGAACATTTGCAAGATTATGATGATCAACCTAGAGAAAGCATGTTAGATGATGATTGGAATCGTGACGGTGATAGGGCTGAAAATGAACTAGAAAACAGCAGGGTACATGGTGGAGATGTGGATAAGGACCGTAGCTTAGATGTGGATCCAGACAAAAAGATGGATAGGATTAGTGATCCTGATAAAAGTTTTGACGAACATAAAAAAGAACAACCGAGAAGAAACATCGATTTGAATGTGACAAATCAAAATAGTCCATCAGATTCTATTGGGGACCACAATGATGAGGTAGAAGATGAATTAGAGAGGTCAATTCAACTGCTTGATCAACTAAAAAAGGAGGTTTCTAAGCTGGAAGAGGGATTGGAAGAAAGAAGACTTAATGTTATGGAGTTACAAAAGCACTCTAAGAAACGGGAGGATGCAGTGATTACTGCAAAGAAAAAATCTTTATATCGCCAGATGCAGTTGACCAAGCTGCATGAATGTTTTCTGCAAGTGCACGATTCCACAGAAAGACTTAAAACCAGTGAAAAAGAACTTCAGGCTCTAGTTGAATCAATATTGTTCGAGAGTGACGGCGATGGCGATGGTGGTCTTGGACAACTTACAAATGGAAGTCTTGATGGTAGATAG 1695 0.4289 MTLDDDSSIYVGGLPYDATDETIRTVFNLYGAILDVKIINDQRTFGKCYCFVTFTNPRSAIDAINDMNGRTINGRVVKVNGVKSRGSGGGGGRSNFGRERERYYHHNDERNGDWDRGGRGREIRDQDYDRVRDREIRDQDYDHGNEKDGYRNRGSDWTRGGDWTRQHQRSRDRDRSRDRDRSRDLDRDRDRDRRVEHMQNYDGQARESMLVRDRSRDRDRDRDRRVEHMLDYDGQARASMLGRDRSRDHDRDRDRRVEHMQDYDGQARESVLDRDRSRDRDRDRDRGIKVEHLQDYDDQARESMLDRDGSRDCDRDRSRRVEHLQGYDDQARESMLDRDGSRDRDIMVRDRRVEHLQDYDDQPRESMLDDDWNRDGDRAENELENSRVHGGDVDKDRSLDVDPDKKMDRISDPDKSFDEHKKEQPRRNIDLNVTNQNSPSDSIGDHNDEVEDELERSIQLLDQLKKEVSKLEEGLEERRLNVMELQKHSKKREDAVITAKKKSLYRQMQLTKLHECFLQVHDSTERLKTSEKELQALVESILFESDGDGDGGLGQLTNGSLDGR 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01099 564 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 7 84 IPR000504 GO:0003723
Mepo1g01099 564 SMART rrm2_1 8 80 IPR003954 GO:0003676
Mepo1g01099 564 SMART rrm1_1 8 80 IPR000504 GO:0003723
Mepo1g01099 564 CDD RRM_SF 9 80 - -
Mepo1g01099 564 MobiDBLite consensus disorder prediction 81 121 - -
Mepo1g01099 564 SUPERFAMILY RNA-binding domain, RBD 4 111 IPR035979 GO:0003676
Mepo1g01099 564 MobiDBLite consensus disorder prediction 135 342 - -
Mepo1g01099 564 PANTHER GEO13361P1-RELATED 7 165 - -
Mepo1g01099 564 Gene3D - 2 100 IPR012677 -
Mepo1g01099 564 MobiDBLite consensus disorder prediction 354 428 - -
Mepo1g01099 564 MobiDBLite consensus disorder prediction 95 121 - -
Mepo1g01099 564 MobiDBLite consensus disorder prediction 354 447 - -
Mepo1g01099 564 MobiDBLite consensus disorder prediction 429 443 - -
Mepo1g01099 564 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 9 78 IPR000504 GO:0003723
Mepo1g01099 564 Coils Coil 447 481 - -
Mepo1g01099 564 MobiDBLite consensus disorder prediction 545 564 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01099 Mepo-Chr1 10649691 10653821 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01099 7 79 Eukaryotic Initiation Factors Gene Family AT2G36660 32.877 1.47e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01099 - - tpra:123921035 686.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g01099 1 10649691 10653821 Mepo1g01099 1 10649691 10653821 ECH