Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01087 ATGGATAAGGTTTACTTATTCAAGGGGGTTTCAAATGATTTGCTCTTTCAATTGGTATCTGAGATGAAGCCGGAGTATTTTCCACCTAAAGAAGATGTTATCTTACAAAATGAAGCTCCAACTGATTTTTACATTCTAGTCACTGGTGCTGTGGACTTGGTAGTTCTCAAAGGCGGGGTTGAACAGATTGTCGGTGAGGCGAAAACAGGAGAACTTTGTGGCGAGATTGGTGTACTTTGCTATAAGCCGCAACATTTTACAGTTAGAACCAAACGATTAAGTCAACTGCTGAGGCTGAACCGTACGACCTTCTTGAATATTGTTCAAGCTAACGTTGGCGACGGAACCATAATCATGAATAATCTTCTTCAGCATTTGAAAGAGCTGAACGATCCAATTATGGAGGGAGTTTTGGTAGAGACAGAGAACATGTTAGCTCGCGGTAGGATGGACTTACCAGTAAGTCTATGCTTTGCAGCAGAAAGAGGAGATGATTTGTTGCTACAACAATTGTTAAAACGAGGTTTGGATCCAAATGAATCCGACAATAATGGAAGGACAGCTTTGCATATAGCAGCATGTAAAGGAAAAGAAAACTGTGTTTTACTTCTGTTAGATTATGGGGCAAATCCCAACATTAGAGATTCGGATGGAAATGTAGCACTGTGGGAGGCTATACTTGGAGGACATGAATCAGTAACAAAACTTTTGGCAGAAAATGGTGCAACCTTGCAAATTGGTGATGTTGGTCAATATGCATGCACTGCAGTTGAACAAAACAATTTCAATTTGTTGCAAGACATTGTGCATTACGGAGGAGACATCACGCTTCCAAATAACAGTGTTGGAACCACGGCGTTGCACGTGGCAGTCTCTGAAGACAATGTTGAAATTGTCAAATTCCTATTAGAACATGGTGCTAACATTGACAAACAAGATAAACATGGTTGGAGTCCAAGAGATTTAGCTGACCAACAAGGACATACAGAAATCAAGGCCATTTTTGAAGCCAAAGGAGAAGCTAATAGTAAGATTCAATCTTTTGTTTCTGTGCCTATTCCTGAGAGGCAGGATAGTAAAGTGAGGTACCTTGGTAGATTTACAAGTGAACCAACAATGCCTACACCTCAAGATGGATCATTTCATGGAAATGATGGTTCGTGGATTCAAAATCGACCAAGGCGTAAGAATAATAACTTTCATAATTCGCTCTTTGGGATAATGTCGGCGGCTACCAAAGGAGAAAATGACCAATTTTTCAGTGTTCAAATGAATAACAATGCAAGGAATGGTGTGAAGAGTGTTTCGCTAACCAGAGTAACGATTAGTTGTCCTGAAAAGGGTGAGGTTGCTGGGAAGCTTGTGTTGCTACCTGAAAGTTTTAAAGAGTTACTTGAAATTGGATCTAAGAAATTTGGTATAGTTGCTACAAAGGTTGTTTGCAAAGATGGAGCTGAAATTGATGATATTGAGGTTATTAGAGACGGTGATCATCTTGTTTTTGTTGGTACTGGTGAGGTGCTAGATTCCAATTGTACAACACCCTCTAATGGTGTCAATCCATAA 1566 0.3991 MDKVYLFKGVSNDLLFQLVSEMKPEYFPPKEDVILQNEAPTDFYILVTGAVDLVVLKGGVEQIVGEAKTGELCGEIGVLCYKPQHFTVRTKRLSQLLRLNRTTFLNIVQANVGDGTIIMNNLLQHLKELNDPIMEGVLVETENMLARGRMDLPVSLCFAAERGDDLLLQQLLKRGLDPNESDNNGRTALHIAACKGKENCVLLLLDYGANPNIRDSDGNVALWEAILGGHESVTKLLAENGATLQIGDVGQYACTAVEQNNFNLLQDIVHYGGDITLPNNSVGTTALHVAVSEDNVEIVKFLLEHGANIDKQDKHGWSPRDLADQQGHTEIKAIFEAKGEANSKIQSFVSVPIPERQDSKVRYLGRFTSEPTMPTPQDGSFHGNDGSWIQNRPRRKNNNFHNSLFGIMSAATKGENDQFFSVQMNNNARNGVKSVSLTRVTISCPEKGEVAGKLVLLPESFKELLEIGSKKFGIVATKVVCKDGAEIDDIEVIRDGDHLVFVGTGEVLDSNCTTPSNGVNP 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01087 521 FunFam Potassium channel KAT2 1 130 - -
Mepo1g01087 521 Pfam Ankyrin repeats (3 copies) 156 246 IPR002110 GO:0005515
Mepo1g01087 521 ProSiteProfiles Ankyrin repeat profile. 217 249 IPR002110 GO:0005515
Mepo1g01087 521 ProSiteProfiles Ankyrin repeat profile. 184 216 IPR002110 GO:0005515
Mepo1g01087 521 PRINTS Ankyrin repeat signature 185 200 IPR002110 GO:0005515
Mepo1g01087 521 PRINTS Ankyrin repeat signature 298 312 IPR002110 GO:0005515
Mepo1g01087 521 Gene3D - 152 337 IPR036770 -
Mepo1g01087 521 ProSiteProfiles Ankyrin repeat region circular profile. 184 215 - -
Mepo1g01087 521 SUPERFAMILY Ankyrin repeat 155 336 IPR036770 -
Mepo1g01087 521 Pfam KHA, dimerisation domain of potassium ion channel 439 501 IPR021789 -
Mepo1g01087 521 SMART ANK_2a 184 213 IPR002110 GO:0005515
Mepo1g01087 521 SMART ANK_2a 217 246 IPR002110 GO:0005515
Mepo1g01087 521 SMART ANK_2a 151 180 IPR002110 GO:0005515
Mepo1g01087 521 SMART ANK_2a 282 311 IPR002110 GO:0005515
Mepo1g01087 521 SMART cnmp_10 6 123 IPR000595 -
Mepo1g01087 521 Pfam Cyclic nucleotide-binding domain 25 110 IPR000595 -
Mepo1g01087 521 ProSiteProfiles Ankyrin repeat profile. 282 314 IPR002110 GO:0005515
Mepo1g01087 521 ProSiteProfiles KHA domain profile. 439 519 IPR021789 -
Mepo1g01087 521 CDD CAP_ED 6 111 IPR000595 -
Mepo1g01087 521 Pfam Ankyrin repeats (many copies) 283 323 IPR002110 GO:0005515
Mepo1g01087 521 SUPERFAMILY cAMP-binding domain-like 2 126 IPR018490 -
Mepo1g01087 521 ProSiteProfiles cAMP/cGMP binding motif profile. 6 108 IPR000595 -
Mepo1g01087 521 Gene3D Jelly Rolls 1 139 IPR014710 -
Mepo1g01087 521 ProSiteProfiles Ankyrin repeat region circular profile. 282 314 - -
Mepo1g01087 521 PANTHER POTASSIUM CHANNEL AKT1 2 502 IPR045319 GO:0005249|GO:0006813
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01087 Mepo-Chr1 10507621 10511025 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01087 1 501 Ion Channels AT2G26650 65.278 0.0 649
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01087 K21867 - gmx:100819491 795.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g01087 1 10507621 10511025 Mepo1g01087 1 10507621 10511025 ECH